RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 LGALS9CQ6DKI2 356 aa14.16□□□□□ -0.14
CLIP2-201ENST00000223398 KLK5Q9Y337 293 aaPredicted RBP14.16□□□□□ -0.14
CLIP2-201ENST00000223398 LY6G6DO95868 133 aa14.16□□□□□ -0.14
CLIP2-201ENST00000223398 OBSL1O75147 1896 aa14.15□□□□□ -0.14
CLIP2-201ENST00000223398 NAV2Q8IVL1 2488 aa14.14□□□□□ -0.15
CLIP2-201ENST00000223398 ODF3BA8MYP8 253 aa14.14□□□□□ -0.15
CLIP2-201ENST00000223398 FGF6P10767 208 aa14.14□□□□□ -0.15
CLIP2-201ENST00000223398 INSL3P51460 131 aa14.14□□□□□ -0.15
CLIP2-201ENST00000223398 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
CLIP2-201ENST00000223398 ANAPC13Q9BS18 74 aa14.14□□□□□ -0.15
CLIP2-201ENST00000223398 SLC25A29Q8N8R3 303 aa14.13□□□□□ -0.15
CLIP2-201ENST00000223398 MAP6D1Q9H9H5 199 aa14.13□□□□□ -0.15
CLIP2-201ENST00000223398 SOCS3O14543 225 aa14.13□□□□□ -0.15
CLIP2-201ENST00000223398 FAM167A-AS1Q96KT0 104 aa14.13□□□□□ -0.15
CLIP2-201ENST00000223398 TRAV4A0A0B4J268 109 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 CCDC140Q96MF4 163 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 SIGMAR1Q99720 223 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 ABCA2Q9BZC7 2435 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 EP400Q96L91 3159 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 PIEZO2Q9H5I5 2752 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 DAZ2Q13117 558 aaKnown RBP14.12□□□□□ -0.15
CLIP2-201ENST00000223398 DAZ4Q86SG3 579 aaKnown RBP14.12□□□□□ -0.15
CLIP2-201ENST00000223398 DAZ3Q9NR90 486 aaKnown RBP14.12□□□□□ -0.15
CLIP2-201ENST00000223398 COX7A2LO14548 114 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 IGLL1P15814 213 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 TIRAPP58753 221 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 PRR14LQ5THK1 2151 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 GAGE2BQ13066 116 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 SH2D6Q7Z4S9 175 aa14.12□□□□□ -0.15
CLIP2-201ENST00000223398 ZNF503Q96F45 646 aa14.11□□□□□ -0.15
CLIP2-201ENST00000223398 C9orf47Q6ZRZ4 202 aa14.11□□□□□ -0.15
CLIP2-201ENST00000223398 MDFICQ9P1T7 246 aa14.11□□□□□ -0.15
CLIP2-201ENST00000223398 KLK12Q9UKR0 248 aa14.11□□□□□ -0.15
CLIP2-201ENST00000223398 SPANXA1Q9NS26 97 aa14.11□□□□□ -0.15
CLIP2-201ENST00000223398 VSIG2Q96IQ7 327 aa14.1□□□□□ -0.15
CLIP2-201ENST00000223398 IGHG4P01861 327 aa14.1□□□□□ -0.15
CLIP2-201ENST00000223398 TRAV13-2A0A0B4J235 113 aa14.1□□□□□ -0.15
CLIP2-201ENST00000223398 C10orf99Q6UWK7 81 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 ZFP2Q6ZN57 461 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 DSCAMO60469 2012 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 TRBV7-3A0A075B6L6 115 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 C11orf45Q8TAV5 145 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 A0A0J9YXV3 536 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 A0A0J9YX75 114 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 RPL39P62891 51 aaKnown RBP14.09□□□□□ -0.15
CLIP2-201ENST00000223398 HAMPP81172 84 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
CLIP2-201ENST00000223398 RBMY1FQ15415 496 aaKnown RBP14.08□□□□□ -0.15
CLIP2-201ENST00000223398 FAM110AQ9BQ89 295 aa14.08□□□□□ -0.15
CLIP2-201ENST00000223398 ZNF106Q9H2Y7 1883 aaKnown RBP14.08□□□□□ -0.16
CLIP2-201ENST00000223398 K7ERJ3 54 aa14.08□□□□□ -0.16
CLIP2-201ENST00000223398 Q6ZSV7 163 aa14.08□□□□□ -0.16
CLIP2-201ENST00000223398 COX8AP10176 69 aa14.07□□□□□ -0.16
CLIP2-201ENST00000223398 TNRC6AQ8NDV7 1962 aaKnown RBP14.07□□□□□ -0.16
CLIP2-201ENST00000223398 ETDCA0A1B0GVM5 59 aa14.07□□□□□ -0.16
CLIP2-201ENST00000223398 PRO1854Q9UHT4 67 aa14.07□□□□□ -0.16
CLIP2-201ENST00000223398 TINCRA0A1B0GVN0 87 aa14.07□□□□□ -0.16
CLIP2-201ENST00000223398 PLA2G2AP14555 144 aa14.07□□□□□ -0.16
CLIP2-201ENST00000223398 LINC00482Q8N8I6 264 aa14.06□□□□□ -0.16
CLIP2-201ENST00000223398 ZNF747Q9BV97 191 aa14.06□□□□□ -0.16
CLIP2-201ENST00000223398 C11orf71Q6IPW1 123 aa14.06□□□□□ -0.16
CLIP2-201ENST00000223398 C1orf229Q6ZS94 237 aaPredicted RBP14.06□□□□□ -0.16
CLIP2-201ENST00000223398 TRAV12-1A0A0B4J245 112 aa14.05□□□□□ -0.16
CLIP2-201ENST00000223398 CDSNQ15517 529 aa14.05□□□□□ -0.16
CLIP2-201ENST00000223398 TMEM263Q8WUH6 116 aaKnown RBP14.05□□□□□ -0.16
CLIP2-201ENST00000223398 DSCR8Q96T75 97 aa14.05□□□□□ -0.16
CLIP2-201ENST00000223398 IGLC2P0DOY2 106 aa14.05□□□□□ -0.16
CLIP2-201ENST00000223398 IGLC3P0DOY3 106 aa14.05□□□□□ -0.16
CLIP2-201ENST00000223398 C10orf91Q5T1B1 145 aa14.05□□□□□ -0.16
CLIP2-201ENST00000223398 ZFAND6Q6FIF0 208 aa14.04□□□□□ -0.16
CLIP2-201ENST00000223398 TIMM17AQ99595 171 aa14.04□□□□□ -0.16
CLIP2-201ENST00000223398 NCOA6Q14686 2063 aaPredicted RBP14.04□□□□□ -0.16
CLIP2-201ENST00000223398 MED12LQ86YW9 2145 aa14.04□□□□□ -0.16
CLIP2-201ENST00000223398 CEND1Q8N111 149 aa14.04□□□□□ -0.16
CLIP2-201ENST00000223398 GTSF1Q8WW33 167 aa14.04□□□□□ -0.16
CLIP2-201ENST00000223398 KIAA1549LQ6ZVL6 1849 aa14.03□□□□□ -0.16
CLIP2-201ENST00000223398 PLA2G2EQ9NZK7 142 aa14.03□□□□□ -0.16
CLIP2-201ENST00000223398 C20orf144Q9BQM9 153 aa14.03□□□□□ -0.16
CLIP2-201ENST00000223398 ZNF124Q15973 351 aa14.03□□□□□ -0.16
CLIP2-201ENST00000223398 TRAV26-1A0A087WT03 109 aa14.02□□□□□ -0.16
CLIP2-201ENST00000223398 SHISA2Q6UWI4 295 aa14.02□□□□□ -0.16
CLIP2-201ENST00000223398 PRO0255Q9UI72 69 aa14.02□□□□□ -0.16
CLIP2-201ENST00000223398 TP53TG3Q9ULZ0 132 aa14.02□□□□□ -0.16
CLIP2-201ENST00000223398 CHD3Q12873 2000 aaKnown RBP14.02□□□□□ -0.16
CLIP2-201ENST00000223398 K7EMI3 77 aa14.02□□□□□ -0.16
CLIP2-201ENST00000223398 DLEU1O43261 78 aa14.02□□□□□ -0.16
CLIP2-201ENST00000223398 TM2D2Q9BX73 214 aa14.02□□□□□ -0.17
CLIP2-201ENST00000223398 SORL1Q92673 2214 aa14.02□□□□□ -0.17
CLIP2-201ENST00000223398 hADV29S1A0JD25 119 aa14.02□□□□□ -0.17
CLIP2-201ENST00000223398 INAFM2P0DMQ5 153 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 IGF1P05019 195 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 UBE2V1Q13404 147 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 PCP2Q8IVA1 136 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 LYPD6BQ8NI32 183 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 COX7B2Q8TF08 81 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 CARD19Q96LW7 228 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 IGKV1D-37A0A075B6S9 117 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 Q6ZTI0 123 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 DEFB114Q30KQ6 69 aa14.01□□□□□ -0.17
CLIP2-201ENST00000223398 DAND5Q8N907 189 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms