RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 H3BVH4 76 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 IGLV1-51P01701 117 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 FCER1GP30273 86 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 RNASE4P34096 147 aaKnown RBP11.2□□□□□ -0.62
PAF1-201ENST00000221265 LEPP41159 167 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 ODF3L2Q3SX64 289 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 FOXI2Q6ZQN5 318 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 OR2K2Q8NGT1 345 aa11.2□□□□□ -0.62
PAF1-201ENST00000221265 ANKRD39Q53RE8 183 aa11.19□□□□□ -0.62
PAF1-201ENST00000221265 SPANXN1Q5VSR9 72 aa11.19□□□□□ -0.62
PAF1-201ENST00000221265 Q6ZVH6 145 aa11.19□□□□□ -0.62
PAF1-201ENST00000221265 SMIM15Q7Z3B0 74 aa11.19□□□□□ -0.62
PAF1-201ENST00000221265 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
PAF1-201ENST00000221265 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
PAF1-201ENST00000221265 NUDT3O95989 172 aa11.18□□□□□ -0.62
PAF1-201ENST00000221265 Q8N8P6 123 aa11.18□□□□□ -0.62
PAF1-201ENST00000221265 NRACQ8N912 160 aa11.18□□□□□ -0.62
PAF1-201ENST00000221265 TRAV12-2A0A075B6T6 113 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 PRSS47A8MTI9 375 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 KLLNB2CW77 178 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 BVES-AS1Q5T3Y7 98 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 AMTNQ6UX39 209 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 ORAOV1Q8WV07 137 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
PAF1-201ENST00000221265 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
PAF1-201ENST00000221265 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
PAF1-201ENST00000221265 SPRY2O43597 315 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
PAF1-201ENST00000221265 FGF6P10767 208 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 SPINK13Q1W4C9 94 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 ANXA2RQ3ZCQ2 193 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 C2orf91Q6ZV80 131 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 H3BMM0 161 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 HLA-DRB4P13762 266 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 TMEM158Q8WZ71 300 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 DKK2Q9UBU2 259 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 COX11Q9Y6N1 276 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 HLA-DRB4X5D2U9 266 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 CMYA5Q8N3K9 4069 aa11.16□□□□□ -0.62
PAF1-201ENST00000221265 DUSP14O95147 198 aaKnown RBP11.15□□□□□ -0.62
PAF1-201ENST00000221265 TRAV12-3A0A0B4J271 114 aa11.15□□□□□ -0.63
PAF1-201ENST00000221265 CD7P09564 240 aa11.15□□□□□ -0.63
PAF1-201ENST00000221265 C12orf54Q6X4T0 127 aa11.15□□□□□ -0.63
PAF1-201ENST00000221265 WFDC10AQ9H1F0 79 aa11.15□□□□□ -0.63
PAF1-201ENST00000221265 ASIPP42127 132 aa11.14□□□□□ -0.63
PAF1-201ENST00000221265 ODF3Q96PU9 254 aa11.14□□□□□ -0.63
PAF1-201ENST00000221265 M0R381 172 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 GNRH2O43555 120 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
PAF1-201ENST00000221265 TCTAP57738 103 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 CDKN1BP46527 198 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 ODF1Q14990 250 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 MRAP2Q96G30 205 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 MUC4Q99102 2169 aa11.13□□□□□ -0.63
PAF1-201ENST00000221265 C7orf71A4D174 169 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 A8MTW9 85 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 OR11H12B2RN74 326 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 SMIM17P0DL12 118 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 LAGE3Q14657 143 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 BOD1L2Q8IYS8 172 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 ZMAT4Q9H898 229 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 PRSS1P07477 247 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 RNASE3P12724 160 aaKnown RBP11.12□□□□□ -0.63
PAF1-201ENST00000221265 PHLDA3Q9Y5J5 127 aa11.12□□□□□ -0.63
PAF1-201ENST00000221265 RBMY1A1P0DJD3 496 aaKnown RBP11.11□□□□□ -0.63
PAF1-201ENST00000221265 RBMY1CP0DJD4 496 aa11.11□□□□□ -0.63
PAF1-201ENST00000221265 RBMY1FQ15415 496 aaKnown RBP11.11□□□□□ -0.63
PAF1-201ENST00000221265 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
PAF1-201ENST00000221265 C14orf178Q8N769 122 aaPredicted RBP11.1□□□□□ -0.63
PAF1-201ENST00000221265 RASL10AQ92737 203 aa11.1□□□□□ -0.63
PAF1-201ENST00000221265 DPH3P1Q9H4G8 78 aa11.1□□□□□ -0.63
PAF1-201ENST00000221265 CCL25O15444 150 aa11.1□□□□□ -0.63
PAF1-201ENST00000221265 SMIM2Q9BVW6 85 aa11.1□□□□□ -0.63
PAF1-201ENST00000221265 HHLA3Q9XRX5 114 aa11.1□□□□□ -0.63
PAF1-201ENST00000221265 PCP2Q8IVA1 136 aa11.09□□□□□ -0.63
PAF1-201ENST00000221265 NBEAL2Q6ZNJ1 2754 aa11.09□□□□□ -0.63
PAF1-201ENST00000221265 ATP5LO75964 103 aa11.08□□□□□ -0.63
PAF1-201ENST00000221265 TMEM97Q5BJF2 176 aa11.08□□□□□ -0.63
PAF1-201ENST00000221265 C3orf56Q8N813 242 aa11.08□□□□□ -0.63
PAF1-201ENST00000221265 NMUP48645 174 aa11.08□□□□□ -0.64
PAF1-201ENST00000221265 UBE2V1Q13404 147 aa11.08□□□□□ -0.64
PAF1-201ENST00000221265 C9orf66Q5T8R8 295 aa11.08□□□□□ -0.64
PAF1-201ENST00000221265 STHQ8IWL8 128 aa11.08□□□□□ -0.64
PAF1-201ENST00000221265 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
PAF1-201ENST00000221265 ANK2Q01484 3957 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 IGKCP01834 107 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 PRM2P04554 102 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 SUMO2P61956 95 aaKnown RBP11.07□□□□□ -0.64
PAF1-201ENST00000221265 FAM159AQ6UWV7 190 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
PAF1-201ENST00000221265 SIVA1O15304 175 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 NXPH4O95158 308 aa11.07□□□□□ -0.64
PAF1-201ENST00000221265 ERASQ7Z444 233 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms