RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 CFC1P0CG37 223 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 ANKRD29Q8N6D5 301 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 HIGD2AQ9BW72 106 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 SIRPDQ9H106 197 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 GAGE12HA6NDE8 117 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 IGHV4-31P0DP07 118 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 CCL25O15444 150 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 PROP1O75360 226 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 IGLL1P15814 213 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 UBE2V1Q13404 147 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 ZNF843Q8N446 348 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 TTC28Q96AY4 2481 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 WNK1Q9H4A3 2382 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 FGF23Q9GZV9 251 aaPredicted RBP8.13□□□□□ -1.11
TRPS1-201ENST00000220888 CACNA1AO00555 2505 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 PTPN13Q12923 2485 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 COX8AP10176 69 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 ZNF726P1Q15940 193 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 A0A0J9YXV3 536 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 RBM3P98179 157 aaKnown RBP8.13□□□□□ -1.11
TRPS1-201ENST00000220888 Q8N7P7 452 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 DKK2Q9UBU2 259 aa8.13□□□□□ -1.11
TRPS1-201ENST00000220888 HIGD2BQ4VC39 106 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 WFDC9Q8NEX5 89 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 RS1O15537 224 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 IGLC2P0DOY2 106 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 IGLC3P0DOY3 106 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 UBE2D1P51668 147 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 WIPF3A6NGB9 483 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 IGKV1-17P01599 117 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 RITA1Q96K30 269 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 FNDC1Q4ZHG4 1894 aaPredicted RBP8.12□□□□□ -1.11
TRPS1-201ENST00000220888 C9orf118A6NHY6 69 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 LY6G6DO95868 133 aa8.12□□□□□ -1.11
TRPS1-201ENST00000220888 MRPL52Q86TS9 123 aaKnown RBP8.12□□□□□ -1.11
TRPS1-201ENST00000220888 TP53BP1Q12888 1972 aaPredicted RBP8.12□□□□□ -1.11
TRPS1-201ENST00000220888 NACAE9PAV3 2078 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 SMIM9A6NGZ8 99 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 LY6G6CO95867 125 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
TRPS1-201ENST00000220888 ASPHD1Q5U4P2 390 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 LYRM9A8MSI8 78 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 ZNF664Q8N3J9 261 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 Q8NA96 180 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 FAM110AQ9BQ89 295 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 FAM222AQ5U5X8 452 aa8.11□□□□□ -1.11
TRPS1-201ENST00000220888 SHANK1Q9Y566 2161 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 F8W1H4 67 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 Q6YL49 198 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 ZNF524Q96C55 264 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 C19orf84I3L1E1 186 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 DLEU1O43261 78 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 SPG11Q96JI7 2443 aa8.1□□□□□ -1.11
TRPS1-201ENST00000220888 CASC2Q6XLA1 102 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 NFE4Q86UQ8 179 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 NTN5Q8WTR8 489 aaPredicted RBP8.09□□□□□ -1.11
TRPS1-201ENST00000220888 IGLV3-1P01715 115 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 TRAV10A0A0B4J240 114 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 TRBV10-1A0A0K0K1A3 114 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 TEX22C9J3V5 150 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 PRB2P02812 416 aaPredicted RBP8.09□□□□□ -1.11
TRPS1-201ENST00000220888 CSPG4Q6UVK1 2322 aa8.09□□□□□ -1.11
TRPS1-201ENST00000220888 A0A0J9YX75 114 aa8.09□□□□□ -1.12
TRPS1-201ENST00000220888 IGKV4-1P06312 121 aa8.09□□□□□ -1.12
TRPS1-201ENST00000220888 Q6ZVH6 145 aa8.09□□□□□ -1.12
TRPS1-201ENST00000220888 FAM19A1Q7Z5A9 133 aa8.08□□□□□ -1.12
TRPS1-201ENST00000220888 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.08□□□□□ -1.12
TRPS1-201ENST00000220888 A0A096LNI7 61 aa8.08□□□□□ -1.12
TRPS1-201ENST00000220888 GBF1Q92538 1859 aa8.08□□□□□ -1.12
TRPS1-201ENST00000220888 MED13Q9UHV7 2174 aa8.08□□□□□ -1.12
TRPS1-201ENST00000220888 IGLV1-47P01700 117 aa8.08□□□□□ -1.12
TRPS1-201ENST00000220888 COX7BP24311 80 aa8.08□□□□□ -1.12
TRPS1-201ENST00000220888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.08□□□□□ -1.12
TRPS1-201ENST00000220888 WI2-2373I1.2A0A1W2PRP0 233 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 PYY3Q5JQD4 70 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 WDR81Q562E7 1941 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 VWA8A3KMH1 1905 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 K7ERJ3 54 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 MED14OSP0DP75 135 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 LMO4P61968 165 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 C12orf74Q32Q52 190 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
TRPS1-201ENST00000220888 M0R2N4 97 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 SIVA1O15304 175 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 REG3AQ06141 175 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 UFSP1Q6NVU6 142 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 IGLV2-18A0A075B6J9 118 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 MIFP14174 115 aa8.07□□□□□ -1.12
TRPS1-201ENST00000220888 LINC01548A6NM66 108 aa8.06□□□□□ -1.12
TRPS1-201ENST00000220888 TRBV12-3P01733 135 aa8.06□□□□□ -1.12
TRPS1-201ENST00000220888 UNQ9165/PRO28630Q6UXU0 137 aa8.06□□□□□ -1.12
TRPS1-201ENST00000220888 DOPEY1Q5JWR5 2465 aa8.06□□□□□ -1.12
TRPS1-201ENST00000220888 LINC00269Q8N2A0 174 aa8.06□□□□□ -1.12
TRPS1-201ENST00000220888 ODF3L1Q8IXM7 274 aa8.06□□□□□ -1.12
TRPS1-201ENST00000220888 ZNF747Q9BV97 191 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms