RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Tmem52bQ0VBF2 186 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Znf329Q6GQR8 522 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Mlst8Q9DCJ1 326 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Shank1D3YZU1 2167 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Arfgef3Q3UGY8 2170 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Ighv1-19A0A0A6YWX0 117 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Trbv3A0A0A6YYE2 117 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Gm14124A2AU83 715 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Olfr1116E9PXB8 307 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Gm6665F6Y363 85 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Zfp708F8VPP0 541 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Ascl2O35885 263 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Sftpa1P35242 248 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Olfr495Q8VF12 330 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Ssbp2Q9CYZ8 361 aa14.29□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Olfr1458A0A1L1SSD5 307 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 MymxQ2Q5T5 84 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Arl14eplQ3UKZ7 152 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Prss28Q924N9 274 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Ceacam11Q9D0Z8 303 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 BptfA2A654 3036 aaKnown RBP14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Scgb2a2J3KMP9 96 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Cib3Q0P523 160 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Tctn2Q2MV57 700 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Spred3Q6P6N5 408 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Cdcp2Q8BQH6 427 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 FibinQ9CQS3 217 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 CnmdQ9Z1F6 334 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Olfr466E9Q2B9 308 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Twist1P26687 206 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Sumo1P63166 101 aaKnown RBP14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Cited1P97769 203 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Wfdc8Q4KUS1 273 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Gm5148Q8BGG2 154 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Vmn1r222Q8R269 308 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Fgfrl1Q91V87 529 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 EpcamQ99JW5 315 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Fam103a1Q9CQY2 119 aaKnown RBP14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 G6pc2Q9Z186 355 aa14.28□□□□□ -0.12
Ckap4-202ENSMUST00000167671 Spint5J3KMK8 105 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gm21732J3QM79 361 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gm21921J3QNB5 361 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Lgals3P16110 264 aaKnown RBP14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Pcgf2P23798 342 aaKnown RBP14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Rtl4Q3URY0 304 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Tmem190Q9D2E9 166 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Rnf125Q9D9R0 233 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Hs3st3b1Q9QZS6 390 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Dmxl2Q8BPN8 3032 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Igkv6-15A0A140T8M5 115 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gm5741B2RVA4 72 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gfra3O35118 397 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 PtafrQ62035 341 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Nabp2Q8R2Y9 212 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gpr87Q99MT7 358 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Tmem9bQ9JJR8 199 aa14.27□□□□□ -0.13
Ckap4-202ENSMUST00000167671 ApcsP12246 224 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 CenpmQ9CQA0 180 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Ssbp3Q9D032 388 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Olfr959Q9EQ86 311 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 PpbpQ9EQI5 113 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Frem1Q684R7 2191 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Znf385cA2A5E6 429 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Ren2P00796 401 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Q3U1D9 316 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Mapk1ip1Q9D7G9 263 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Wdr31Q9JHB4 367 aa14.26□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Olfr715bE9Q725 315 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Wt1P22561 449 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Cd200r3Q5UKY4 296 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Znrd1Q791N7 123 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Olfr822Q8VFU1 312 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 GrhprQ91Z53 328 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 St6galnac6Q9JM95 333 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Pcnx1Q9QYC1 2344 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Olfr1024A2ASU7 327 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Tmem92B7ZWI3 162 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gm6034E9Q101 117 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gm11027G8JL69 66 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Ankrd55Q8BLD6 626 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Susd2Q9DBX3 820 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Ctnnbip1Q9JJN6 81 aa14.25□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Olfr1189A2AV11 306 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Wipf2Q6PEV3 440 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Smim19Q80ZU4 107 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Gm4894Q8CA09 118 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Slc36a4Q8CH36 500 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Prss37Q9DAA4 237 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 AplnrQ9WV08 377 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 KalrnA2CG49 2964 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Asxl3Q8C4A5 2259 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Trav6d-3A0A075B6B3 112 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Ly6c1P0CW02 131 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Trav6-3Q5R1E6 112 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Olfr1441Q8VFV3 318 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Q9D8L0 127 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Prr30Q9D9B7 401 aa14.24□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Ighv1-15A0A0A6YXA5 117 aa14.23□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Vmn1r224E9PWK2 298 aa14.23□□□□□ -0.13
Ckap4-202ENSMUST00000167671 Rnf212F6TQD1 307 aa14.23□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms