RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 P01796 113 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 P01797 113 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 P01799 113 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr143P34985 313 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Sap30lQ5SQF8 182 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rab9bQ8BHH2 201 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Mob1bQ8BPB0 216 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1323Q8VF35 309 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Golt1bQ9CR60 138 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Itpr1P11881 2749 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr779E9PUS9 130 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gfra3O35118 397 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Rhox10Q4TU83 196 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Prdx2Q61171 198 aaKnown RBP13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Zic3Q62521 466 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Vstm2aQ8R0A6 236 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Rab31Q921E2 194 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Znhit3Q9CQK1 151 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Cxcr6Q9EQ16 351 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Igkv4-80A0A075B5L7 116 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Defa-rs7P50715 91 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 PaxxQ8K0Y7 205 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr495Q8VF12 330 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr577Q8VH11 312 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 GmppaQ922H4 420 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr959Q9EQ86 311 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ighv1-36A0A0A6YXT2 117 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Tmem139E9PX92 214 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Pde6dO55057 150 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 P01804 111 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Rbx1P62878 108 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Pef1Q8BFY6 275 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 Prr15Q9D1T5 122 aa13.39□□□□□ -0.27
Trim28-201ENSMUST00000005705 F5O88783 2183 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ighv8-9A0A0G2JET1 119 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Il3raP26952 396 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Taar4Q5QD15 347 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Trdv4Q5R1A3 115 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Clec4b2Q67DU8 208 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr1474Q7TQQ8 314 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Znf22Q9ERU3 237 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gpr35Q9ES90 307 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Trav6-1A0A075B5Z8 112 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm4884E9PVP9 694 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Scgb1b3J3QJY4 93 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr1272Q8VGN8 308 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gpr87Q99MT7 358 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 Syt13Q9EQT6 426 aa13.38□□□□□ -0.27
Trim28-201ENSMUST00000005705 A630076J17RikJ3QQ32 107 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Neurog3P70661 214 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 1700009N14RikQ14AA6 216 aaKnown RBP13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Prr30Q9D9B7 401 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ms4a12A0A087WSB9 263 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm4565A0A140LJ87 301 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm6176J3QK59 301 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Tmem52bQ0VBF2 186 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm4567Q3UTA8 301 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 PtafrQ62035 341 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Lypd6Q8BPP5 171 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Cysltr2Q920A1 309 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Arl13aQ9D416 372 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Pxmp4Q9JJW0 212 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Hs3st3b1Q9QZS6 390 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Nubp1Q9R060 320 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Mef2bO55087 349 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ccl1P10146 92 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Zfp936Q3ULA8 456 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Znf260Q62513 407 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Bst1Q64277 311 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Wdr83osQ6ZWX0 106 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr1183Q8VFF8 303 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Mgst1Q91VS7 155 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Muc4Q8JZM8 3443 aa13.37□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr1098A2AVB0 315 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 SstP60041 116 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Fbxl7Q5BJ29 491 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ssbp3Q9D032 388 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Tnfrsf13cQ9D8D0 175 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Prss37Q9DAA4 237 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Cmya5Q70KF4 3739 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Trav12d-1A0N8R0 115 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Khdc1bP0C7A0 126 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Wnt5bP22726 359 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Acrv1P50289 261 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Q3U1D9 316 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm17324Q8C6J8 137 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Vmn1r237Q8R296 289 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Bpifa5Q9CQX3 270 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ceacam11Q9D0Z8 303 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Crim1Q9JLL0 1037 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 DscamQ9ERC8 2013 aa13.36□□□□□ -0.27
Trim28-201ENSMUST00000005705 Ceacam15A0A0B4J1L0 234 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Q0VG49 157 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm10840Q3V2K9 103 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Gm5148Q8BGG2 154 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Klf17Q8CFA7 341 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Olfr262Q8VFV8 312 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Pear1Q8VIK5 1034 aa13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Rer1Q9CQU3 196 aaKnown RBP13.35□□□□□ -0.27
Trim28-201ENSMUST00000005705 Cd200r1Q9ES57 326 aa13.35□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms