RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 RBFOX3A6NFN3 312 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 PGPEP1LA6NFU8 196 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 IGLV2-11P01706 119 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 TCRBP04435 133 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 ZNF80P51504 273 aaPredicted RBP5.57□□□□□ -1.52
LINC00339-212ENST00000642072 NKX2-5P52952 324 aaPredicted RBP5.57□□□□□ -1.52
LINC00339-212ENST00000642072 ACOT6Q3I5F7 207 aaPredicted RBP5.57□□□□□ -1.52
LINC00339-212ENST00000642072 TOR2AQ5JU69 321 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 ZNF506Q5JVG8 444 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 UFSP1Q6NVU6 142 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 ATRAIDQ6UW56 229 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 GOLT1AQ6ZVE7 132 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 ARL6IP6Q8N6S5 226 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 Q8N976 141 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 HYLS1Q96M11 299 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 KCNIP2Q9NS61 270 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 NUDT15Q9NV35 164 aa5.57□□□□□ -1.52
LINC00339-212ENST00000642072 GGTLC3B5MD39 225 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 H0YIZ8 118 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 EIF3GO75821 320 aaKnown RBP eCLIP5.56□□□□□ -1.52
LINC00339-212ENST00000642072 RNASE3P12724 160 aaKnown RBP5.56□□□□□ -1.52
LINC00339-212ENST00000642072 KHDC3LQ587J8 217 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 LINC00479Q96M42 142 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 ATP5SQ99766 215 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 TREM1Q9NP99 234 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 OR5AC2Q9NZP5 309 aa5.56□□□□□ -1.52
LINC00339-212ENST00000642072 PGPA6NDG6 321 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 GAGE12JA6NER3 117 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 RPL37AP61513 92 aaKnown RBP5.55□□□□□ -1.52
LINC00339-212ENST00000642072 GNG5P63218 68 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 GAGE1Q13065 139 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 GAGE4Q13068 117 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 GAGE5Q13069 117 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 ZFP2Q6ZN57 461 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 NIT1Q86X76 327 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 CYB561D1Q8N8Q1 229 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 TMEM75Q8N9X5 138 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 PARLQ9H300 379 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 MBD2Q9UBB5 411 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 RPH3ALQ9UNE2 315 aa5.55□□□□□ -1.52
LINC00339-212ENST00000642072 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 A0A087WWC5 75 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 C17orf112F2Z3M2 114 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 FFAR4Q5NUL3 377 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 PIK3CD-AS1Q5SR53 167 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 CMTM2Q8TAZ6 248 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 RMI2Q96E14 147 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 SGK494Q96LW2 274 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 SAMD10Q9BYL1 202 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 NMES1Q9C002 83 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 MED28Q9H204 178 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 SH3BGRL3Q9H299 93 aa5.54□□□□□ -1.52
LINC00339-212ENST00000642072 TAAR5O14804 337 aa5.53□□□□□ -1.52
LINC00339-212ENST00000642072 H2AFB2P0C5Z0 115 aa5.53□□□□□ -1.52
LINC00339-212ENST00000642072 TAS2R45P59539 299 aa5.53□□□□□ -1.52
LINC00339-212ENST00000642072 Q5BKY6 102 aa5.53□□□□□ -1.52
LINC00339-212ENST00000642072 SLC7A5P1Q8MH63 180 aa5.53□□□□□ -1.52
LINC00339-212ENST00000642072 C14orf178Q8N769 122 aaPredicted RBP5.53□□□□□ -1.52
LINC00339-212ENST00000642072 KLK12Q9UKR0 248 aa5.53□□□□□ -1.52
LINC00339-212ENST00000642072 A8MWV9 139 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 PANO1I0J062 215 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 SIX6O95475 246 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 GCGP01275 180 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 TCRAP04437 139 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 FAM74A1Q5RGS3 127 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 PQLC2Q6ZP29 291 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 C9orf62Q8N4C0 152 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 OR2T35Q8NGX2 323 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 UBE2WQ96B02 151 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 JPT2Q9H910 190 aa5.52□□□□□ -1.53
LINC00339-212ENST00000642072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
LINC00339-212ENST00000642072 IGKV3D-20A0A0C4DH25 116 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 SERTM2A0A1B0GWG4 89 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 SEC11BP0C7V7 166 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 FGF8P55075 233 aaPredicted RBP5.51□□□□□ -1.53
LINC00339-212ENST00000642072 LRRC37A5PQ49AS3 106 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 ENHOQ6UWT2 76 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 OR10G9Q8NGN4 311 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 SUN5Q8TC36 379 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 NDFIP1Q9BT67 221 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 PSG8Q9UQ74 426 aa5.51□□□□□ -1.53
LINC00339-212ENST00000642072 LINC00862A6NCI5 91 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 GIPP09681 153 aaPredicted RBP5.5□□□□□ -1.53
LINC00339-212ENST00000642072 H2BFSP57053 126 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 RAB2AP61019 212 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 CIRBPQ14011 172 aaKnown RBP5.5□□□□□ -1.53
LINC00339-212ENST00000642072 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 Q6ZRU5 148 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 C5orf17Q8NAS9 161 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 OR10G7Q8NGN6 311 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 WFDC1Q9HC57 220 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 HSPB11Q9Y547 144 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 URGCP-MRPS24S4R325 110 aa5.5□□□□□ -1.53
LINC00339-212ENST00000642072 USP17L23D6RBM5 183 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 HMGB3O15347 200 aaKnown RBP5.49□□□□□ -1.53
LINC00339-212ENST00000642072 PRSS1P07477 247 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 ARL14EPLP0DKL9 152 aa5.49□□□□□ -1.53
LINC00339-212ENST00000642072 FLI1Q01543 452 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms