RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 KCNS1Q96KK3 526 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 IGHV3-16A0A0C4DH30 117 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 NUPR1O60356 82 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 MED14OSP0DP75 135 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
PHGDH-232ENST00000641947 CMC4P56277 68 aaPredicted RBP12.86□□□□□ -0.35
PHGDH-232ENST00000641947 PDZD11Q5EBL8 140 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 HIST3H2BBQ8N257 126 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 C3orf56Q8N813 242 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 MDFICQ9P1T7 246 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 XCL2Q9UBD3 114 aa12.86□□□□□ -0.35
PHGDH-232ENST00000641947 GIG44P09565 113 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-232ENST00000641947 IQCJQ1A5X6 159 aa12.85□□□□□ -0.35
PHGDH-232ENST00000641947 FAM104BQ5XKR9 115 aa12.85□□□□□ -0.35
PHGDH-232ENST00000641947 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 DEFB125Q8N687 156 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 C18orf32Q8TCD1 76 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 RNF185Q96GF1 192 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 TMEM191AQ9H0A3 160 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 M0R381 172 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 EVI2AP22794 236 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 Q0VG73 95 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 C9orf85Q96MD7 179 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 RCHY1Q96PM5 261 aa12.84□□□□□ -0.35
PHGDH-232ENST00000641947 INSP01308 110 aa12.83□□□□□ -0.36
PHGDH-232ENST00000641947 RPL35AP18077 110 aaKnown RBP12.83□□□□□ -0.36
PHGDH-232ENST00000641947 CACNG7P62955 275 aa12.83□□□□□ -0.36
PHGDH-232ENST00000641947 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.36
PHGDH-232ENST00000641947 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
PHGDH-232ENST00000641947 PHLDA3Q9Y5J5 127 aa12.83□□□□□ -0.36
PHGDH-232ENST00000641947 NXPH4O95158 308 aa12.82□□□□□ -0.36
PHGDH-232ENST00000641947 C1orf158Q8N1D5 194 aa12.82□□□□□ -0.36
PHGDH-232ENST00000641947 WIPF1O43516 503 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 SERF1AO75920 110 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 SHISA2Q6UWI4 295 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 CBY3A6NI87 242 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 HTN1P15515 57 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 RAB4AP20338 218 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 OR10J3Q5JRS4 329 aa12.81□□□□□ -0.36
PHGDH-232ENST00000641947 MCRIP2Q9BUT9 160 aaKnown RBP12.81□□□□□ -0.36
PHGDH-232ENST00000641947 D6R8Y8 96 aa12.8□□□□□ -0.36
PHGDH-232ENST00000641947 TMEM158Q8WZ71 300 aa12.8□□□□□ -0.36
PHGDH-232ENST00000641947 U3KQK5 164 aa12.8□□□□□ -0.36
PHGDH-232ENST00000641947 NACAE9PAV3 2078 aa12.8□□□□□ -0.36
PHGDH-232ENST00000641947 NCR2O95944 276 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 AMBPP02760 352 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 GTSCR1Q86UQ5 136 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 BAGE3Q86Y29 109 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 URB1-AS1Q96HZ7 61 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 C20orf144Q9BQM9 153 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 TRGV11A0A075B6L2 103 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 LINC01587Q99440 93 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 JPT2Q9H910 190 aa12.79□□□□□ -0.36
PHGDH-232ENST00000641947 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
PHGDH-232ENST00000641947 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
PHGDH-232ENST00000641947 NUTF2P61970 127 aaKnown RBP12.77□□□□□ -0.36
PHGDH-232ENST00000641947 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.36
PHGDH-232ENST00000641947 CSNK1G2-AS1Q8NCQ2 148 aa12.77□□□□□ -0.36
PHGDH-232ENST00000641947 ESDP10768 282 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 GATA1P15976 413 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-232ENST00000641947 AZU1P20160 251 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 AKR1D1P51857 326 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 C14orf178Q8N769 122 aaPredicted RBP12.76□□□□□ -0.37
PHGDH-232ENST00000641947 KIF25-AS1Q9Y6Z4 181 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 IGHV3OR16-12A0A075B7B8 117 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 FABP4P15090 132 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 OXLD1Q5BKU9 147 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 ORMDL3Q8N138 153 aa12.76□□□□□ -0.37
PHGDH-232ENST00000641947 NPYP01303 97 aa12.75□□□□□ -0.37
PHGDH-232ENST00000641947 PRELID3AQ96N28 172 aa12.75□□□□□ -0.37
PHGDH-232ENST00000641947 GSN-AS1Q9NRJ2 163 aa12.75□□□□□ -0.37
PHGDH-232ENST00000641947 NBEAL2Q6ZNJ1 2754 aa12.75□□□□□ -0.37
PHGDH-232ENST00000641947 CKS2P33552 79 aa12.74□□□□□ -0.37
PHGDH-232ENST00000641947 LINC00315P59091 139 aa12.74□□□□□ -0.37
PHGDH-232ENST00000641947 AP1S3Q96PC3 154 aa12.74□□□□□ -0.37
PHGDH-232ENST00000641947 TMEM208Q9BTX3 173 aa12.74□□□□□ -0.37
PHGDH-232ENST00000641947 MORN3Q6PF18 240 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-232ENST00000641947 SMIM15Q7Z3B0 74 aa12.74□□□□□ -0.37
PHGDH-232ENST00000641947 DPH3P1Q9H4G8 78 aa12.74□□□□□ -0.37
PHGDH-232ENST00000641947 S100A2P29034 98 aa12.73□□□□□ -0.37
PHGDH-232ENST00000641947 NIT1Q86X76 327 aa12.73□□□□□ -0.37
PHGDH-232ENST00000641947 SAMD10Q9BYL1 202 aa12.73□□□□□ -0.37
PHGDH-232ENST00000641947 A0A087WWL8 130 aa12.72□□□□□ -0.37
PHGDH-232ENST00000641947 KRTAP10-11P60412 298 aa12.72□□□□□ -0.37
PHGDH-232ENST00000641947 ZNF415Q09FC8 603 aa12.72□□□□□ -0.37
PHGDH-232ENST00000641947 ZNF876PQ49A33 203 aa12.71□□□□□ -0.37
PHGDH-232ENST00000641947 RNASEKQ6P5S7 137 aaKnown RBP12.71□□□□□ -0.37
PHGDH-232ENST00000641947 NRACQ8N912 160 aa12.71□□□□□ -0.37
PHGDH-232ENST00000641947 OR10D4PQ8NGN7 298 aa12.71□□□□□ -0.37
PHGDH-232ENST00000641947 IL17DQ8TAD2 202 aa12.71□□□□□ -0.37
PHGDH-232ENST00000641947 RNASE8Q8TDE3 154 aaKnown RBP12.71□□□□□ -0.37
PHGDH-232ENST00000641947 MGPP08493 103 aa12.71□□□□□ -0.38
PHGDH-232ENST00000641947 ZNF705AQ6ZN79 300 aaPredicted RBP12.71□□□□□ -0.38
PHGDH-232ENST00000641947 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.38
PHGDH-232ENST00000641947 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms