RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-227ENST00000640648 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-227ENST00000640648 OOSP1A8MZH6 123 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 SMKR1H3BMG3 65 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 H3BRN7 92 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-227ENST00000640648 ZC2HC1AQ96GY0 325 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 DYSFO75923 2080 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 KIAA1671Q9BY89 1806 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 TRBV7-3A0A075B6L6 115 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 NDUFS5O43920 106 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 MDS2Q8NDY4 140 aa6.5□□□□□ -1.37
NECAP1-227ENST00000640648 RNASE6Q93091 150 aaKnown RBP6.5□□□□□ -1.37
NECAP1-227ENST00000640648 SP5Q6BEB4 398 aaPredicted RBP6.49□□□□□ -1.37
NECAP1-227ENST00000640648 MUSTN1Q8IVN3 82 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 DEFB104AQ8WTQ1 72 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 PCNTO95613 3336 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 TIMM17BO60830 172 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 FAM222AQ5U5X8 452 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 Q8TAT8 98 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 WNK1Q9H4A3 2382 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 FRMPD3Q5JV73 1810 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 IGFL4Q6B9Z1 124 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 ACACBO00763 2458 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 PCNX3Q9H6A9 2034 aa6.49□□□□□ -1.37
NECAP1-227ENST00000640648 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 UBE2BP63146 152 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 TNCP24821 2201 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 LOC107984640A0A0U1RRK4 108 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 IGHV3-33P01772 117 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 LINC00158P58513 81 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 DYNAPQ8N1N2 210 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 GAFA1Q96PS6 74 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 COL4A3Q01955 1670 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 J3QLI3 93 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 Q6ZR03 302 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 C5orf38Q86SI9 138 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 TRAV7A0A075B6U4 112 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 LY6G6EA0A0G2JKS1 128 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 A0A0J9YX75 114 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 IGHV1-8P0DP01 117 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 HAMPP81172 84 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 KIR2DL5BQ8NHK3 375 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 U3KQA8 63 aa6.48□□□□□ -1.37
NECAP1-227ENST00000640648 TMEM256-PLSCR3K7ERE1 68 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 ELANEP08246 267 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
NECAP1-227ENST00000640648 PAX4O43316 350 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 IGKV3OR2-268A0A0C4DH90 116 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 P0C879 139 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 UBE2D1P51668 147 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 LYPD2Q6UXB3 125 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 TRAV41A0A0B4J266 112 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 M0R1W7 72 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 COL8A2P25067 703 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 C20orf197Q8N268 126 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 RNF152Q8N8N0 203 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 CACNA1AO00555 2505 aa6.47□□□□□ -1.37
NECAP1-227ENST00000640648 TRBV7-1A0A0A6YYK4 115 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 TEX49A0A1B0GTD5 131 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 LY6HO94772 140 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 FUSP35637 526 aaKnown RBP eCLIP6.46□□□□□ -1.37
NECAP1-227ENST00000640648 LINC00311Q8N616 119 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 FAM167A-AS1Q96KT0 104 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 ANKHD1Q8IWZ3 2542 aaKnown RBP6.46□□□□□ -1.37
NECAP1-227ENST00000640648 IGHV1-3A0A0C4DH29 117 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 TMEM178BH3BS89 294 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 LST1O00453 97 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 BLCAPP62952 87 aa6.46□□□□□ -1.37
NECAP1-227ENST00000640648 NDUFB1O75438 58 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 MIAQ16674 131 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 MRPS12O15235 138 aaKnown RBP6.46□□□□□ -1.38
NECAP1-227ENST00000640648 ZNF876PQ49A33 203 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 ZMAT4Q9H898 229 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 ALPK3Q96L96 1907 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 ZNF134P52741 427 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 ODF3L1Q8IXM7 274 aa6.46□□□□□ -1.38
NECAP1-227ENST00000640648 FGF23Q9GZV9 251 aaPredicted RBP6.46□□□□□ -1.38
NECAP1-227ENST00000640648 NOTCH2Q04721 2471 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 A0A0J9YY99 117 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 TRBV10-3A0A0K0K1G6 114 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 SBSPONQ8IVN8 264 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 C11orf44Q8N8P7 122 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 PLXNB1O43157 2135 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 PCDH15Q96QU1 1955 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 ADARB2-AS1A8MUL3 147 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 GP9P14770 177 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 CSPG4Q6UVK1 2322 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 MP68P56378 58 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 ZNF672Q499Z4 452 aaPredicted RBP6.45□□□□□ -1.38
NECAP1-227ENST00000640648 C3orf56Q8N813 242 aa6.45□□□□□ -1.38
NECAP1-227ENST00000640648 DAZ1Q9NQZ3 744 aaKnown RBP6.45□□□□□ -1.38
NECAP1-227ENST00000640648 C15orf32Q32M92 178 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 PROP1O75360 226 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 FOXE3Q13461 319 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 ZFP2Q6ZN57 461 aa6.44□□□□□ -1.38
NECAP1-227ENST00000640648 TRBV12-3P01733 135 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms