RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, human

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-223	ENST00000640640	PGPEP1	Q9NXJ5	209 aa		13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	TANC2	Q9HCD6	1990 aa		13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	MYMX	A0A1B0GTQ4	84 aa		13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	LMO4	P61968	165 aa		13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	CFHR3	Q02985	330 aa		13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640		Q71RC1	249 aa	Predicted RBP	13.63	□□□□□ -0.23
SCARB2-223	ENST00000640640	C6orf226	Q5I0X4	101 aa		13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	ARHGAP32	A7KAX9	2087 aa		13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	PRAC2	D3DTV9	90 aa		13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	GATA1	P15976	413 aa	Predicted RBP	13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	ZNRF2	Q8NHG8	242 aa		13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	MAJIN	Q3KP22	176 aa		13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	C11orf68	Q9H3H3	251 aa	Known RBP	13.62	□□□□□ -0.23
SCARB2-223	ENST00000640640	FRMD6-AS1	P0C7T7	363 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	GAGE12B	A1L429	117 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	GAGE7	O76087	117 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	IGHG2	P01859	326 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	GAGE12F	P0CL80	117 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	GAGE12G	P0CL81	117 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	GAGE12I	P0CL82	117 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	DKK2	Q9UBU2	259 aa		13.61	□□□□□ -0.23
SCARB2-223	ENST00000640640	PAX4	O43316	350 aa		13.6	□□□□□ -0.23
SCARB2-223	ENST00000640640	HLA-DRB4	P13762	266 aa		13.6	□□□□□ -0.23
SCARB2-223	ENST00000640640	HLA-DRB4	X5D2U9	266 aa		13.6	□□□□□ -0.23
SCARB2-223	ENST00000640640	IGHV3-38	A0A0C4DH36	116 aa		13.6	□□□□□ -0.23
SCARB2-223	ENST00000640640	ZNF493	Q6ZR52	646 aa		13.6	□□□□□ -0.23
SCARB2-223	ENST00000640640	ZNF48	Q96MX3	618 aa	Predicted RBP	13.6	□□□□□ -0.23
SCARB2-223	ENST00000640640	SRSF2	Q01130	221 aa	Known RBP	13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	DLX4	Q92988	240 aa	Predicted RBP	13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	ZNF625	Q96I27	306 aa	Predicted RBP	13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	ODF3B	A8MYP8	253 aa		13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	TSPAN13	O95857	204 aa		13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	SLURP1	P55000	103 aa		13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	C3orf56	Q8N813	242 aa		13.59	□□□□□ -0.23
SCARB2-223	ENST00000640640	PCNT	O95613	3336 aa		13.58	□□□□□ -0.24
SCARB2-223	ENST00000640640	FSTL3	O95633	263 aa		13.58	□□□□□ -0.24
SCARB2-223	ENST00000640640	C19orf84	I3L1E1	186 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	CCL24	O00175	119 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	LURAP1L	Q8IV03	231 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	ZFYVE26	Q68DK2	2539 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	KIR2DL5B	A0A0G2JN68	375 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	KIR2DL5B	A0A0G2JPC4	375 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	KIR2DL5A	Q8N109	375 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	ABCA12	Q86UK0	2595 aa		13.57	□□□□□ -0.24
SCARB2-223	ENST00000640640	TRBV25-1	A0A075B6N4	114 aa		13.56	□□□□□ -0.24
SCARB2-223	ENST00000640640	ATXN8	Q156A1	80 aa		13.56	□□□□□ -0.24
SCARB2-223	ENST00000640640	SLC25A20	O43772	301 aa		13.56	□□□□□ -0.24
SCARB2-223	ENST00000640640	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.56	□□□□□ -0.24
SCARB2-223	ENST00000640640	LINC00173	Q6ZV60	143 aa		13.55	□□□□□ -0.24
SCARB2-223	ENST00000640640	JMJD1C	Q15652	2540 aa		13.55	□□□□□ -0.24
SCARB2-223	ENST00000640640	SS18	Q15532	418 aa		13.55	□□□□□ -0.24
SCARB2-223	ENST00000640640	PRORY	Q9H606	182 aa		13.55	□□□□□ -0.24
SCARB2-223	ENST00000640640	C19orf71	A6NCJ1	209 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640		K7EMI3	77 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640		K7EMT4	169 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	TDRG1	Q3Y452	100 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	S100A7L2	Q5SY68	101 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	C9orf47	Q6ZRZ4	202 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	SPAG8	Q99932	426 aa	Predicted RBP	13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	UNQ9165/PRO28630	Q6UXU0	137 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	PRSS29P	A6NIE9	313 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	C10orf126	Q8N4M7	172 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	LINC01548	A6NM66	108 aa		13.54	□□□□□ -0.24
SCARB2-223	ENST00000640640	DEFB1	P60022	68 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	GPHB5	Q86YW7	130 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	MTURN	Q8N3F0	131 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	TMEM243	Q9BU79	118 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	IGHV4OR15-8	A0A075B7B6	117 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640		A0A087WW49	117 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	DEFB121	Q5J5C9	76 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	BVES-AS1	Q5T3Y7	98 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	APRG1	Q8IVJ8	170 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	JPT2	Q9H910	190 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	DAD1	P61803	113 aa		13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	RPL39L	Q96EH5	51 aa	Known RBP	13.53	□□□□□ -0.24
SCARB2-223	ENST00000640640	TRBV6-1	A0A0K0K1D8	114 aa		13.52	□□□□□ -0.24
SCARB2-223	ENST00000640640	IGLV2-8	P01709	118 aa		13.52	□□□□□ -0.24
SCARB2-223	ENST00000640640		F5H768	121 aa		13.52	□□□□□ -0.24
SCARB2-223	ENST00000640640	TRBV12-3	P01733	135 aa		13.52	□□□□□ -0.24
SCARB2-223	ENST00000640640	GHRH	P01286	108 aa		13.52	□□□□□ -0.25
SCARB2-223	ENST00000640640		U3KQE9	123 aa		13.52	□□□□□ -0.25
SCARB2-223	ENST00000640640		A6NDX4	124 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	VWC2L	B2RUY7	222 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	GATD1	Q8NB37	220 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640		A0A1B0GV72	72 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	LEPROT	O15243	131 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	NDUFA12	Q9UI09	145 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	CRYGB	P07316	175 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	CCDC140	Q96MF4	163 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	PRRC2C	Q9Y520	2896 aa	Known RBP	13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	C9orf118	A6NHY6	69 aa		13.51	□□□□□ -0.25
SCARB2-223	ENST00000640640	C2orf70	A6NJV1	201 aa		13.5	□□□□□ -0.25
SCARB2-223	ENST00000640640		J3QQQ9	107 aa		13.5	□□□□□ -0.25
SCARB2-223	ENST00000640640	CTRL	P40313	264 aa		13.5	□□□□□ -0.25
SCARB2-223	ENST00000640640	LINC00322	Q6ZN03	302 aa	Predicted RBP	13.5	□□□□□ -0.25
SCARB2-223	ENST00000640640	SIGMAR1	Q99720	223 aa		13.5	□□□□□ -0.25
SCARB2-223	ENST00000640640	PCP2	Q8IVA1	136 aa		13.5	□□□□□ -0.25
SCARB2-223	ENST00000640640	RHOH	Q15669	191 aa		13.49	□□□□□ -0.25

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