RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
TRIM3-215ENST00000639856 IFI27L1Q96BM0 104 aa11.32□□□□□ -0.6
TRIM3-215ENST00000639856 SCRT2Q9NQ03 307 aa11.32□□□□□ -0.6
TRIM3-215ENST00000639856 LY6G6DO95868 133 aa11.31□□□□□ -0.6
TRIM3-215ENST00000639856 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
TRIM3-215ENST00000639856 DUX3Q96PT4 197 aa11.31□□□□□ -0.6
TRIM3-215ENST00000639856 PRSS47A8MTI9 375 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
TRIM3-215ENST00000639856 ASIPP42127 132 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 SLC25A34Q6PIV7 304 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 NRACQ8N912 160 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 GOLT1BQ9Y3E0 138 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 IGLV2-18A0A075B6J9 118 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 ZNF25P17030 456 aaPredicted RBP11.3□□□□□ -0.6
TRIM3-215ENST00000639856 FCER1GP30273 86 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 SLURP1P55000 103 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 C21orf62-AS1Q17RA5 79 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 WFDC3Q8IUB2 231 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 STPG4Q8N801 248 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 Q8N8P6 123 aa11.3□□□□□ -0.6
TRIM3-215ENST00000639856 KLLNB2CW77 178 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 LEPP41159 167 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 C11orf44Q8N8P7 122 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 SETXQ7Z333 2677 aaKnown RBP11.29□□□□□ -0.6
TRIM3-215ENST00000639856 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 RNASE1P07998 156 aaKnown RBP11.29□□□□□ -0.6
TRIM3-215ENST00000639856 TFPI2P48307 235 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 HINT1P49773 126 aaPredicted RBP11.29□□□□□ -0.6
TRIM3-215ENST00000639856 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 TP73-AS1Q9UF72 201 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 PHLDA3Q9Y5J5 127 aa11.29□□□□□ -0.6
TRIM3-215ENST00000639856 M0R381 172 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 LGALS9O00182 355 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 OR11H1Q8NG94 326 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 DPF1Q92782 380 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
TRIM3-215ENST00000639856 NSD1Q96L73 2696 aaPredicted RBP11.28□□□□□ -0.6
TRIM3-215ENST00000639856 RNASE3P12724 160 aaKnown RBP11.27□□□□□ -0.6
TRIM3-215ENST00000639856 KLHL30-AS1Q8NEE0 82 aa11.27□□□□□ -0.6
TRIM3-215ENST00000639856 FLNBO75369 2602 aaKnown RBP11.27□□□□□ -0.61
TRIM3-215ENST00000639856 GNRH2O43555 120 aa11.27□□□□□ -0.61
TRIM3-215ENST00000639856 SPRY2O43597 315 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 HILS1P60008 231 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 ADAMTSL5Q6ZMM2 481 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 TMEM158Q8WZ71 300 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 C18orf15Q96N68 181 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 DPH3P1Q9H4G8 78 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 WNK1Q9H4A3 2382 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 LINC01619G3V211 115 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 K7EQG2 157 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 NPSP0C0P6 89 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 COX8AP10176 69 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 SNRPD3P62318 126 aaKnown RBP11.26□□□□□ -0.61
TRIM3-215ENST00000639856 SCGB2A2Q13296 93 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 LINC01006Q8NI28 216 aa11.26□□□□□ -0.61
TRIM3-215ENST00000639856 ZNF418Q8TF45 676 aaPredicted RBP11.26□□□□□ -0.61
TRIM3-215ENST00000639856 SORL1Q92673 2214 aa11.25□□□□□ -0.61
TRIM3-215ENST00000639856 PSMG4Q5JS54 123 aa11.25□□□□□ -0.61
TRIM3-215ENST00000639856 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
TRIM3-215ENST00000639856 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
TRIM3-215ENST00000639856 TMEM208Q9BTX3 173 aa11.25□□□□□ -0.61
TRIM3-215ENST00000639856 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 CD28P10747 220 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 GAGE1Q13065 139 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 LAGE3Q14657 143 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 C14orf178Q8N769 122 aaPredicted RBP11.24□□□□□ -0.61
TRIM3-215ENST00000639856 A0A0J9YX75 114 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 DLEU1O43261 78 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 ANKRD39Q53RE8 183 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 MUC4Q99102 2169 aa11.24□□□□□ -0.61
TRIM3-215ENST00000639856 NXPH4O95158 308 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 AP1S3Q96PC3 154 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 FN1P02751 2386 aaKnown RBP11.23□□□□□ -0.61
TRIM3-215ENST00000639856 SMIM17P0DL12 118 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 MPV17L2Q567V2 206 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 DLX4Q92988 240 aaPredicted RBP11.23□□□□□ -0.61
TRIM3-215ENST00000639856 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
TRIM3-215ENST00000639856 TRAV12-3A0A0B4J271 114 aa11.22□□□□□ -0.61
TRIM3-215ENST00000639856 C7orf71A4D174 169 aa11.22□□□□□ -0.61
TRIM3-215ENST00000639856 INAFM1C9JVW0 142 aa11.22□□□□□ -0.61
TRIM3-215ENST00000639856 ODF1Q14990 250 aa11.22□□□□□ -0.61
TRIM3-215ENST00000639856 RASL10AQ92737 203 aa11.22□□□□□ -0.61
TRIM3-215ENST00000639856 C16orf95Q9H693 158 aa11.22□□□□□ -0.61
TRIM3-215ENST00000639856 ATP5LO75964 103 aa11.21□□□□□ -0.61
TRIM3-215ENST00000639856 NUDT3O95989 172 aa11.21□□□□□ -0.61
TRIM3-215ENST00000639856 PRSS1P07477 247 aa11.21□□□□□ -0.61
TRIM3-215ENST00000639856 SUMO2P61956 95 aaKnown RBP11.21□□□□□ -0.61
TRIM3-215ENST00000639856 OR9G4Q8NGQ1 327 aa11.21□□□□□ -0.61
TRIM3-215ENST00000639856 RAX2Q96IS3 184 aa11.21□□□□□ -0.61
TRIM3-215ENST00000639856 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
TRIM3-215ENST00000639856 C20orf78Q9BR46 151 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms