RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 Q6ZQT7 251 aa14.37□□□□□ -0.11
SCARB2-213ENST00000638680 HIGD1BQ9P298 99 aa14.37□□□□□ -0.11
SCARB2-213ENST00000638680 A0A0J9YY99 117 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 C5orf38Q86SI9 138 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 DOPEY2Q9Y3R5 2298 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 TEN1Q86WV5 123 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 DOCK7Q96N67 2140 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 ABCA1O95477 2261 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 PRAC2D3DTV9 90 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 PLA2G2CQ5R387 149 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 SPTBN2O15020 2390 aa14.36□□□□□ -0.11
SCARB2-213ENST00000638680 IGHV4-59P01825 116 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 RPL39P62891 51 aaKnown RBP14.35□□□□□ -0.11
SCARB2-213ENST00000638680 APRG1Q8IVJ8 170 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 TRAV4A0A0B4J268 109 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 GRNP28799 593 aaKnown RBP14.35□□□□□ -0.11
SCARB2-213ENST00000638680 DEFB136Q30KP8 78 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 BAALCQ8WXS3 180 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 PRB1P04280 392 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 NBL1P41271 181 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 DEFB105AQ8NG35 78 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 DEFB112Q30KQ8 113 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 IGKV1OR2-108A0A075B7D4 117 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 LINC01620Q4KN68 170 aa14.35□□□□□ -0.11
SCARB2-213ENST00000638680 USF3Q68DE3 2245 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 C3orf56Q8N813 242 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 WI2-2373I1.2A0A1W2PRP0 233 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 NCOR1O75376 2440 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 IGLV2-23P01705 113 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 TOMM6Q96B49 74 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 SPANXCQ9NY87 97 aa14.34□□□□□ -0.11
SCARB2-213ENST00000638680 BUB3O43684 328 aa14.33□□□□□ -0.11
SCARB2-213ENST00000638680 FOXI1Q12951 378 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 DAND5Q8N907 189 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 EML6Q6ZMW3 1958 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 IGHV4-4A0A075B6R2 117 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 C11orf1Q9H5F2 150 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 TMEM258P61165 79 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 C16orf54Q6UWD8 224 aa14.33□□□□□ -0.12
SCARB2-213ENST00000638680 SMIM20Q8N5G0 67 aa14.32□□□□□ -0.12
SCARB2-213ENST00000638680 AJUBAQ96IF1 538 aa14.32□□□□□ -0.12
SCARB2-213ENST00000638680 SND1-IT1Q9HBX3 110 aa14.32□□□□□ -0.12
SCARB2-213ENST00000638680 A0A0B4J2C4 111 aa14.32□□□□□ -0.12
SCARB2-213ENST00000638680 IGKV3D-7A0A0C4DH55 119 aa14.32□□□□□ -0.12
SCARB2-213ENST00000638680 WNK2Q9Y3S1 2297 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 E7EUB6 86 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 VPREB3Q9UKI3 123 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 FAM236AA0A1B0GUQ0 79 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 FAM236BA0A1B0GV22 79 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 G3V4G9 280 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 K7EQD1 137 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 MRPL36Q9P0J6 103 aaKnown RBP14.31□□□□□ -0.12
SCARB2-213ENST00000638680 COL6A6A6NMZ7 2263 aa14.31□□□□□ -0.12
SCARB2-213ENST00000638680 TEX22C9J3V5 150 aa14.3□□□□□ -0.12
SCARB2-213ENST00000638680 SLURP1P55000 103 aa14.3□□□□□ -0.12
SCARB2-213ENST00000638680 E9PLD3 99 aa14.3□□□□□ -0.12
SCARB2-213ENST00000638680 DENND4CQ5VZ89 1909 aa14.3□□□□□ -0.12
SCARB2-213ENST00000638680 ODF3L1Q8IXM7 274 aa14.3□□□□□ -0.12
SCARB2-213ENST00000638680 ODF1Q14990 250 aa14.29□□□□□ -0.12
SCARB2-213ENST00000638680 CTRLP40313 264 aa14.29□□□□□ -0.12
SCARB2-213ENST00000638680 IGHG2P01859 326 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 FRMPD3Q5JV73 1810 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 IGKV2D-24A0A075B6R9 120 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 H0YGX0 51 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 COX7B2Q8TF08 81 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 A0A1B0GX51 115 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 C9orf47Q6ZRZ4 202 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 IGHV4-38-2P0DP08 117 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 RMI2Q96E14 147 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 PLA2G5P39877 138 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 Q8N1Y9 231 aa14.28□□□□□ -0.12
SCARB2-213ENST00000638680 WT1P19544 449 aaPredicted RBP14.27□□□□□ -0.12
SCARB2-213ENST00000638680 ACACAQ13085 2346 aa14.27□□□□□ -0.12
SCARB2-213ENST00000638680 CLEC2BQ92478 149 aa14.27□□□□□ -0.12
SCARB2-213ENST00000638680 PLXNB3Q9ULL4 1909 aa14.27□□□□□ -0.13
SCARB2-213ENST00000638680 C11orf86A6NJI1 115 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 CCL24O00175 119 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 BLCAPP62952 87 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 HIST2H2BCQ6DN03 193 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 Q8N9W7 124 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 DKK4Q9UBT3 224 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 C19orf71A6NCJ1 209 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 IGLV10-54A0A075B6I4 117 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 LGALS9O00182 355 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 ATOX1O00244 68 aa14.26□□□□□ -0.13
SCARB2-213ENST00000638680 DAZ2Q13117 558 aaKnown RBP14.25□□□□□ -0.13
SCARB2-213ENST00000638680 Q71RC1 249 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-213ENST00000638680 DAZ4Q86SG3 579 aaKnown RBP14.25□□□□□ -0.13
SCARB2-213ENST00000638680 DAZ3Q9NR90 486 aaKnown RBP14.25□□□□□ -0.13
SCARB2-213ENST00000638680 C2orf70A6NJV1 201 aa14.25□□□□□ -0.13
SCARB2-213ENST00000638680 TRBV10-2A0A0K0K1G8 114 aa14.25□□□□□ -0.13
SCARB2-213ENST00000638680 CGB3P0DN86 165 aa14.25□□□□□ -0.13
SCARB2-213ENST00000638680 NDUFS5O43920 106 aa14.25□□□□□ -0.13
SCARB2-213ENST00000638680 GYPEP15421 78 aa14.25□□□□□ -0.13
SCARB2-213ENST00000638680 ZNF503Q96F45 646 aa14.25□□□□□ -0.13
SCARB2-213ENST00000638680 TANC1Q9C0D5 1861 aa14.24□□□□□ -0.13
SCARB2-213ENST00000638680 RNF152Q8N8N0 203 aa14.24□□□□□ -0.13
SCARB2-213ENST00000638680 TIMM17AQ99595 171 aa14.24□□□□□ -0.13
SCARB2-213ENST00000638680 TRBV6-1A0A0K0K1D8 114 aa14.24□□□□□ -0.13
SCARB2-213ENST00000638680 DEFB1P60022 68 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms