RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 GATA4P43694 442 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 TMEM61Q8N0U2 210 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 A4D1N5 150 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 Q8N1Y9 231 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 IGHV1-58A0A0C4DH39 117 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 C10orf55Q5SWW7 151 aa12.04□□□□□ -0.48
UBE3A-227ENST00000638011 FN1P02751 2386 aaKnown RBP12.04□□□□□ -0.48
UBE3A-227ENST00000638011 WFDC2Q14508 124 aa12.03□□□□□ -0.48
UBE3A-227ENST00000638011 SLX1AQ9BQ83 275 aa12.03□□□□□ -0.48
UBE3A-227ENST00000638011 ANGP03950 147 aaKnown RBP12.03□□□□□ -0.48
UBE3A-227ENST00000638011 IGHV3-53P01767 116 aa12.03□□□□□ -0.48
UBE3A-227ENST00000638011 ANXA2RQ3ZCQ2 193 aa12.03□□□□□ -0.48
UBE3A-227ENST00000638011 VOPP1Q96AW1 172 aa12.03□□□□□ -0.48
UBE3A-227ENST00000638011 E9PLD3 99 aa12.03□□□□□ -0.48
UBE3A-227ENST00000638011 C9orf106Q8NAJ2 232 aa12.02□□□□□ -0.48
UBE3A-227ENST00000638011 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.48
UBE3A-227ENST00000638011 CD24P25063 80 aa12.02□□□□□ -0.48
UBE3A-227ENST00000638011 F5H768 121 aa12.02□□□□□ -0.49
UBE3A-227ENST00000638011 H3BUA1 57 aa12.02□□□□□ -0.49
UBE3A-227ENST00000638011 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.49
UBE3A-227ENST00000638011 RPL35AP18077 110 aaKnown RBP12.02□□□□□ -0.49
UBE3A-227ENST00000638011 CFHR1Q03591 330 aa12.02□□□□□ -0.49
UBE3A-227ENST00000638011 PRB3Q04118 309 aaPredicted RBP12.02□□□□□ -0.49
UBE3A-227ENST00000638011 CD177Q8N6Q3 437 aa12.02□□□□□ -0.49
UBE3A-227ENST00000638011 Q6ZRM9 215 aa12.02□□□□□ -0.49
UBE3A-227ENST00000638011 FANCD2OSQ96PS1 177 aa12.02□□□□□ -0.49
UBE3A-227ENST00000638011 ZNRF2Q8NHG8 242 aa12.01□□□□□ -0.49
UBE3A-227ENST00000638011 LINC00311Q8N616 119 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12□□□□□ -0.49
UBE3A-227ENST00000638011 SPINK13Q1W4C9 94 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 GGNQ86UU5 652 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 NXPH4O95158 308 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 ZNF672Q499Z4 452 aaPredicted RBP12□□□□□ -0.49
UBE3A-227ENST00000638011 USP17L23D6RBM5 183 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 C11orf86A6NJI1 115 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 C1orf195Q5TG92 126 aa12□□□□□ -0.49
UBE3A-227ENST00000638011 TIMM17AQ99595 171 aa11.99□□□□□ -0.49
UBE3A-227ENST00000638011 TRAV26-2A0A0B4J265 109 aa11.99□□□□□ -0.49
UBE3A-227ENST00000638011 H3BUX3 64 aa11.99□□□□□ -0.49
UBE3A-227ENST00000638011 GAFA1Q96PS6 74 aa11.99□□□□□ -0.49
UBE3A-227ENST00000638011 RS1O15537 224 aa11.99□□□□□ -0.49
UBE3A-227ENST00000638011 UBE2E1P51965 193 aa11.98□□□□□ -0.49
UBE3A-227ENST00000638011 LHBP01229 141 aa11.98□□□□□ -0.49
UBE3A-227ENST00000638011 PATE3B3GLJ2 98 aa11.98□□□□□ -0.49
UBE3A-227ENST00000638011 LTBRP36941 435 aa11.98□□□□□ -0.49
UBE3A-227ENST00000638011 PRR30Q53SZ7 412 aaPredicted RBP11.98□□□□□ -0.49
UBE3A-227ENST00000638011 SPATA12Q7Z6I5 190 aa11.98□□□□□ -0.49
UBE3A-227ENST00000638011 SAA4P35542 130 aa11.97□□□□□ -0.49
UBE3A-227ENST00000638011 LRRC75A-AS1Q8N1F1 130 aa11.97□□□□□ -0.49
UBE3A-227ENST00000638011 IGKV1D-17A0A075B6S4 117 aa11.97□□□□□ -0.49
UBE3A-227ENST00000638011 FXYD2P54710 66 aa11.97□□□□□ -0.49
UBE3A-227ENST00000638011 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
UBE3A-227ENST00000638011 COX7A2LO14548 114 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 IGHV1-69P01742 117 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 TOMM6Q96B49 74 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 SERP2Q8N6R1 65 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 EFNA2O43921 213 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 VPREB1P12018 145 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 TRAV12-2A0A075B6T6 113 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 A6NED7 52 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 MDS2Q8NDY4 140 aa11.96□□□□□ -0.49
UBE3A-227ENST00000638011 DEFB131AP59861 70 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 FOXE3Q13461 319 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 NDUFA11Q86Y39 141 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 RNF183Q96D59 192 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 RAI1Q7Z5J4 1906 aaPredicted RBP11.96□□□□□ -0.5
UBE3A-227ENST00000638011 CD59P13987 128 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 OVOL3O00110 214 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 ZNF726P1Q15940 193 aa11.96□□□□□ -0.5
UBE3A-227ENST00000638011 TRAV4A0A0B4J268 109 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 LINC01619G3V211 115 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 TGFBR3LH3BV60 316 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 A0A0G2JRQ6 117 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 K7EN84 100 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 XCL1P47992 114 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 LINC01356Q8N9X3 169 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 POLQO75417 2590 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 BPY2O14599 106 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 Q8TCH9 128 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 A0A087WV48 116 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 FOXL2NBQ6ZUU3 175 aa11.95□□□□□ -0.5
UBE3A-227ENST00000638011 NSUN5P1Q3KNT7 163 aa11.94□□□□□ -0.5
UBE3A-227ENST00000638011 MPLKIPQ8TAP9 179 aa11.94□□□□□ -0.5
UBE3A-227ENST00000638011 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
UBE3A-227ENST00000638011 MED14OSP0DP75 135 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 DEFB105AQ8NG35 78 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 ZNF503Q96F45 646 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 CASC2Q6XLA1 102 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 SPRR3Q9UBC9 169 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 CGB7P0DN87 165 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 C4orf48Q5BLP8 95 aa11.93□□□□□ -0.5
UBE3A-227ENST00000638011 A0A0U1RQV1 116 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 TRAV23DV6A0A075B6W5 121 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 TRBV7-3A0A075B6L6 115 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 ELANEP08246 267 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 CTRLP40313 264 aa11.92□□□□□ -0.5
UBE3A-227ENST00000638011 RSPO4Q2I0M5 234 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 688.5 ms