RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 PRR25Q96S07 402 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 NDUFA4L2Q9NRX3 87 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 PYGO1Q9Y3Y4 419 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 V9GYY9 64 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 TRAV13-1A0A0B4J241 112 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 C17orf100A8MU93 164 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 ELANEP08246 267 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 GNLYP22749 145 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 PSMB8P28062 276 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 CCL8P80075 99 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 ORMDL2Q53FV1 153 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 RPL39P5Q59GN2 51 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 PVRIGQ6DKI7 326 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 CEMP1Q6PRD7 247 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-211ENST00000637881 C8orf31Q8N9H6 132 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 SHANK2-AS3Q9BTD1 123 aa6.08□□□□□ -1.44
CDKL5-211ENST00000637881 DEFB108AA8MXU0 73 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 LY6LH3BQJ8 138 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 SH2D1AO60880 128 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 IL17RELQ6ZVW7 336 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 TOMM6Q96B49 74 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 LINC00477Q96M19 166 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 AGPAT4-IT1Q9H0P7 198 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 PEMTQ9UBM1 199 aa6.07□□□□□ -1.44
CDKL5-211ENST00000637881 ZGRF1Q86YA3 2104 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 IGKV3D-15A0A087WSY6 115 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 EPM2AB3EWF7 344 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 H7C423 109 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 J3QKU1 62 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 CCL21O00585 134 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 OXTP01178 125 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 MLANAQ16655 118 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 TMEM86BQ8N661 226 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 CNEP1R1Q8N9A8 125 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 C9orf85Q96MD7 179 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 VKORC1Q9BQB6 163 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 PTPN13Q12923 2485 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 TRBV19A0A075B6N1 114 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 PLAUP00749 431 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 COX6CP09669 75 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 PLA2G2AP14555 144 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 PRIMA1Q86XR5 153 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 C9orf106Q8NAJ2 232 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 UPK3BQ9BT76 320 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 C1orf43Q9BWL3 253 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 DYNLRB1Q9NP97 96 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 COL12A1Q99715 3063 aa6.06□□□□□ -1.44
CDKL5-211ENST00000637881 IQCF6A8MYZ5 107 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 J3QQQ9 107 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 NDUFC2O95298 119 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 IGHV3-9P01782 118 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 PFN2P35080 140 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 RPL18AQ02543 176 aaKnown RBP6.05□□□□□ -1.44
CDKL5-211ENST00000637881 ERCC8Q13216 396 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 PDE6HQ13956 83 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 SIGLEC15Q6ZMC9 328 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 FAM19A4Q96LR4 140 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 FAM215AQ9Y5M1 114 aa6.05□□□□□ -1.44
CDKL5-211ENST00000637881 ANKRD17O75179 2603 aaKnown RBP6.04□□□□□ -1.44
CDKL5-211ENST00000637881 A0A0J9YX75 114 aa6.04□□□□□ -1.44
CDKL5-211ENST00000637881 SAA2P0DJI9 122 aaPredicted RBP6.04□□□□□ -1.44
CDKL5-211ENST00000637881 HOXA4Q00056 320 aaPredicted RBP6.04□□□□□ -1.44
CDKL5-211ENST00000637881 FAM201AQ5SY85 155 aa6.04□□□□□ -1.44
CDKL5-211ENST00000637881 NRACQ8N912 160 aa6.04□□□□□ -1.44
CDKL5-211ENST00000637881 SCGB3A1Q96QR1 104 aa6.04□□□□□ -1.44
CDKL5-211ENST00000637881 TEP1Q99973 2627 aaKnown RBP6.04□□□□□ -1.44
CDKL5-211ENST00000637881 C11orf86A6NJI1 115 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 LST1O00453 97 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 MRPL33O75394 65 aaKnown RBP6.03□□□□□ -1.44
CDKL5-211ENST00000637881 SAA1P0DJI8 122 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-211ENST00000637881 Q1RN00 199 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 SEM1Q6ZVN7 128 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 DAND5Q8N907 189 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 TMEM167AQ8TBQ9 72 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 CXXC4Q9H2H0 198 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 TMEM223A0PJW6 202 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 IGHV4-39P01824 125 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 EXOC3-AS1Q8N2X6 119 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 KLF14Q8TD94 323 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-211ENST00000637881 C8orf49Q96NF6 230 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 SMIM2Q9BVW6 85 aa6.03□□□□□ -1.44
CDKL5-211ENST00000637881 MYO18BQ8IUG5 2567 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 TRAV12-2A0A075B6T6 113 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 IGHV1-69DA0A0B4J2H0 117 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 WNT9BO14905 357 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 TRIAP1O43715 76 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 ZNF22P17026 224 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-211ENST00000637881 FAM216BQ8N7L0 139 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 PSMG3-AS1Q96PY0 264 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 DSCR8Q96T75 97 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 DPH3P1Q9H4G8 78 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 ICOSQ9Y6W8 199 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 FLNCQ14315 2725 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 PCNX1Q96RV3 2341 aa6.02□□□□□ -1.45
CDKL5-211ENST00000637881 POLEQ07864 2286 aa6.01□□□□□ -1.45
CDKL5-211ENST00000637881 RAI1Q7Z5J4 1906 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms