RNA–Protein interactions for RNA: ENST00000637538.1

CLCN2-220, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 5

Gene CLCN2, Length 1,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-220ENST00000637538 KRTAP10-11P60412 298 aa12.21□□□□□ -0.46
CLCN2-220ENST00000637538 MORN3Q6PF18 240 aaPredicted RBP12.21□□□□□ -0.46
CLCN2-220ENST00000637538 TPPP3Q9BW30 176 aa12.21□□□□□ -0.46
CLCN2-220ENST00000637538 XCL2Q9UBD3 114 aa12.21□□□□□ -0.46
CLCN2-220ENST00000637538 SMIM6P0DI80 62 aa12.2□□□□□ -0.46
CLCN2-220ENST00000637538 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
CLCN2-220ENST00000637538 ASIPP42127 132 aa12.2□□□□□ -0.46
CLCN2-220ENST00000637538 HBBP68871 147 aa12.2□□□□□ -0.46
CLCN2-220ENST00000637538 C1orf158Q8N1D5 194 aa12.2□□□□□ -0.46
CLCN2-220ENST00000637538 GATD1Q8NB37 220 aa12.2□□□□□ -0.46
CLCN2-220ENST00000637538 TP53TG3Q9ULZ0 132 aa12.2□□□□□ -0.46
CLCN2-220ENST00000637538 A0A1B0GW15 77 aa12.19□□□□□ -0.46
CLCN2-220ENST00000637538 S100A12P80511 92 aa12.19□□□□□ -0.46
CLCN2-220ENST00000637538 RIGQ13278 110 aa12.19□□□□□ -0.46
CLCN2-220ENST00000637538 IGHV4-4A0A075B6R2 117 aa12.18□□□□□ -0.46
CLCN2-220ENST00000637538 IGHV3-16A0A0C4DH30 117 aa12.18□□□□□ -0.46
CLCN2-220ENST00000637538 H3BVH4 76 aa12.18□□□□□ -0.46
CLCN2-220ENST00000637538 CSNK1G2-AS1Q8NCQ2 148 aa12.18□□□□□ -0.46
CLCN2-220ENST00000637538 C12orf57Q99622 126 aa12.18□□□□□ -0.46
CLCN2-220ENST00000637538 RAB4BP61018 213 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 Q0VG73 95 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 SAMD5Q5TGI4 173 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 BORCS7Q96B45 105 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 C9orf85Q96MD7 179 aa12.17□□□□□ -0.46
CLCN2-220ENST00000637538 MUC21A0A0G2JKD1 596 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 MUC21A0A140T8X8 626 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 NXPH4O95158 308 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 APCSP02743 223 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 CAMPP49913 170 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 C1QTNF4Q9BXJ3 329 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 NTF3P20783 257 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 S100A4P26447 101 aaKnown RBP12.16□□□□□ -0.46
CLCN2-220ENST00000637538 ZNF493Q6ZR52 646 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 HIST1H2BLQ99880 126 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 CSTL1Q9H114 145 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 MSRB1Q9NZV6 116 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 MDFICQ9P1T7 246 aa12.16□□□□□ -0.46
CLCN2-220ENST00000637538 G3V4G9 280 aa12.15□□□□□ -0.46
CLCN2-220ENST00000637538 CACNG7P62955 275 aa12.15□□□□□ -0.46
CLCN2-220ENST00000637538 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
CLCN2-220ENST00000637538 ZMAT5Q9UDW3 170 aaKnown RBP12.15□□□□□ -0.46
CLCN2-220ENST00000637538 MUC4Q99102 2169 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 CBY3A6NI87 242 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 FABP4P15090 132 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 SLAQ13239 276 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 OR10J3Q5JRS4 329 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 OR10D4PQ8NGN7 298 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 LINC01587Q99440 93 aa12.14□□□□□ -0.47
CLCN2-220ENST00000637538 LOC102724200A0A096LPH7 203 aaPredicted RBP12.13□□□□□ -0.47
CLCN2-220ENST00000637538 KIR2DL5BA0A0G2JN68 375 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 KIR2DL5BA0A0G2JPC4 375 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 SPRY2O43597 315 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 PRM2P04554 102 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 ESDP10768 282 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 TWIST1Q15672 202 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 DMRTA1Q5VZB9 504 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 ZNF705AQ6ZN79 300 aaPredicted RBP12.13□□□□□ -0.47
CLCN2-220ENST00000637538 KIR2DL5AQ8N109 375 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 C11orf72Q8NBR9 251 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 KIR2DL5BQ8NHK3 375 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 TMEM18Q96B42 140 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 TGP01266 2768 aa12.13□□□□□ -0.47
CLCN2-220ENST00000637538 IGHV4-30-4P0DP06 118 aa12.12□□□□□ -0.47
CLCN2-220ENST00000637538 PACRGQ96M98 296 aaPredicted RBP12.12□□□□□ -0.47
CLCN2-220ENST00000637538 TIMM8BQ9Y5J9 83 aaPredicted RBP12.12□□□□□ -0.47
CLCN2-220ENST00000637538 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
CLCN2-220ENST00000637538 SSTP61278 116 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 SPANXN1Q5VSR9 72 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 GOLT1BQ9Y3E0 138 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 PHLDA3Q9Y5J5 127 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 A8MZ25 164 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 AZU1P20160 251 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 BAGE3Q86Y29 109 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
CLCN2-220ENST00000637538 HTN1P15515 57 aa12.1□□□□□ -0.47
CLCN2-220ENST00000637538 SRIP30626 198 aa12.1□□□□□ -0.47
CLCN2-220ENST00000637538 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
CLCN2-220ENST00000637538 M0R381 172 aa12.09□□□□□ -0.47
CLCN2-220ENST00000637538 APOC4P55056 127 aa12.09□□□□□ -0.47
CLCN2-220ENST00000637538 ZNF415Q09FC8 603 aa12.09□□□□□ -0.47
CLCN2-220ENST00000637538 FAM104BQ5XKR9 115 aa12.09□□□□□ -0.47
CLCN2-220ENST00000637538 PTH2Q96A98 100 aa12.09□□□□□ -0.47
CLCN2-220ENST00000637538 IGHV3OR16-12A0A075B7B8 117 aa12.08□□□□□ -0.48
CLCN2-220ENST00000637538 NUPR1O60356 82 aa12.08□□□□□ -0.48
CLCN2-220ENST00000637538 PYY3Q5JQD4 70 aa12.08□□□□□ -0.48
CLCN2-220ENST00000637538 KPRPQ5T749 579 aaPredicted RBP12.08□□□□□ -0.48
CLCN2-220ENST00000637538 RNF185Q96GF1 192 aa12.08□□□□□ -0.48
CLCN2-220ENST00000637538 GSN-AS1Q9NRJ2 163 aa12.08□□□□□ -0.48
CLCN2-220ENST00000637538 SERF1AO75920 110 aa12.07□□□□□ -0.48
CLCN2-220ENST00000637538 EVI2AP22794 236 aa12.07□□□□□ -0.48
CLCN2-220ENST00000637538 PIK3CD-AS1Q5SR53 167 aa12.07□□□□□ -0.48
CLCN2-220ENST00000637538 AMN1Q8IY45 258 aa12.07□□□□□ -0.48
CLCN2-220ENST00000637538 TMEM263Q8WUH6 116 aaKnown RBP12.07□□□□□ -0.48
CLCN2-220ENST00000637538 ALKBH7Q9BT30 221 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms