RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SLAQ13239 276 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 TWIST1Q15672 202 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 ZFP82Q8N141 532 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 DEFB125Q8N687 156 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 OR10AG1Q8NH19 301 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 C9orf85Q96MD7 179 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 TP53TG3Q9ULZ0 132 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 PHLDA3Q9Y5J5 127 aa11.22□□□□□ -0.61
CLN6-219ENST00000637329 GNRH2O43555 120 aa11.21□□□□□ -0.61
CLN6-219ENST00000637329 EGFEM1PQ0D2K5 195 aa11.21□□□□□ -0.61
CLN6-219ENST00000637329 SPANXN1Q5VSR9 72 aa11.21□□□□□ -0.61
CLN6-219ENST00000637329 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.61
CLN6-219ENST00000637329 Q8N1Y9 231 aa11.21□□□□□ -0.61
CLN6-219ENST00000637329 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
CLN6-219ENST00000637329 TRRAPQ9Y4A5 3859 aa11.2□□□□□ -0.62
CLN6-219ENST00000637329 CBY3A6NI87 242 aa11.2□□□□□ -0.62
CLN6-219ENST00000637329 S100A6P06703 90 aa11.2□□□□□ -0.62
CLN6-219ENST00000637329 ZNF415Q09FC8 603 aa11.2□□□□□ -0.62
CLN6-219ENST00000637329 GOLT1BQ9Y3E0 138 aa11.2□□□□□ -0.62
CLN6-219ENST00000637329 AGRNO00468 2067 aa11.2□□□□□ -0.62
CLN6-219ENST00000637329 LOC102724200A0A096LPH7 203 aaPredicted RBP11.19□□□□□ -0.62
CLN6-219ENST00000637329 KIR2DL5BA0A0G2JN68 375 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 KIR2DL5BA0A0G2JPC4 375 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 RPL35AP18077 110 aaKnown RBP11.19□□□□□ -0.62
CLN6-219ENST00000637329 KIR2DL5AQ8N109 375 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 SYT8Q8NBV8 401 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 KIR2DL5BQ8NHK3 375 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 AP1S3Q96PC3 154 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 LINC01587Q99440 93 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 TMEM208Q9BTX3 173 aa11.19□□□□□ -0.62
CLN6-219ENST00000637329 MUC21A0A0G2JKD1 596 aa11.18□□□□□ -0.62
CLN6-219ENST00000637329 MUC21A0A140T8X8 626 aa11.18□□□□□ -0.62
CLN6-219ENST00000637329 GIG44P09565 113 aaPredicted RBP11.18□□□□□ -0.62
CLN6-219ENST00000637329 PIK3CD-AS1Q5SR53 167 aa11.18□□□□□ -0.62
CLN6-219ENST00000637329 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
CLN6-219ENST00000637329 C1orf158Q8N1D5 194 aa11.18□□□□□ -0.62
CLN6-219ENST00000637329 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
CLN6-219ENST00000637329 COA6Q5JTJ3 125 aaKnown RBP11.17□□□□□ -0.62
CLN6-219ENST00000637329 PTH2Q96A98 100 aa11.17□□□□□ -0.62
CLN6-219ENST00000637329 NDUFAF3Q9BU61 184 aa11.17□□□□□ -0.62
CLN6-219ENST00000637329 CSTL1Q9H114 145 aa11.17□□□□□ -0.62
CLN6-219ENST00000637329 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
CLN6-219ENST00000637329 SORL1Q92673 2214 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 M0R381 172 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 SRIP30626 198 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 APOC4P55056 127 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 ZNF705AQ6ZN79 300 aaPredicted RBP11.16□□□□□ -0.62
CLN6-219ENST00000637329 CSNK1G2-AS1Q8NCQ2 148 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 SPXQ9BT56 116 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 MSRB1Q9NZV6 116 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 MDFICQ9P1T7 246 aa11.16□□□□□ -0.62
CLN6-219ENST00000637329 PPBPP02775 128 aa11.15□□□□□ -0.62
CLN6-219ENST00000637329 Q0VG73 95 aa11.15□□□□□ -0.62
CLN6-219ENST00000637329 AMN1Q8IY45 258 aa11.15□□□□□ -0.62
CLN6-219ENST00000637329 C11orf72Q8NBR9 251 aa11.15□□□□□ -0.62
CLN6-219ENST00000637329 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
CLN6-219ENST00000637329 TMEM263Q8WUH6 116 aaKnown RBP11.15□□□□□ -0.62
CLN6-219ENST00000637329 ALKBH7Q9BT30 221 aaPredicted RBP11.15□□□□□ -0.62
CLN6-219ENST00000637329 DPH3P1Q9H4G8 78 aa11.15□□□□□ -0.62
CLN6-219ENST00000637329 C5orf52A6NGY3 159 aa11.14□□□□□ -0.63
CLN6-219ENST00000637329 KIAA1644Q3SXP7 199 aa11.14□□□□□ -0.63
CLN6-219ENST00000637329 SAMD5Q5TGI4 173 aa11.14□□□□□ -0.63
CLN6-219ENST00000637329 RNASE8Q8TDE3 154 aaKnown RBP11.14□□□□□ -0.63
CLN6-219ENST00000637329 LAMTOR2Q9Y2Q5 125 aa11.14□□□□□ -0.63
CLN6-219ENST00000637329 U3KQK5 164 aa11.14□□□□□ -0.63
CLN6-219ENST00000637329 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
CLN6-219ENST00000637329 A8MZ25 164 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 M0R2P5 195 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 UBE2CO00762 179 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 EVI2AP22794 236 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 NDUFA6P56556 154 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 SSTP61278 116 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
CLN6-219ENST00000637329 ORMDL3Q8N138 153 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 RNF185Q96GF1 192 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
CLN6-219ENST00000637329 NBEAL2Q6ZNJ1 2754 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 HTN1P15515 57 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 RAB4AP20338 218 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 C18orf32Q8TCD1 76 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 MRAP2Q96G30 205 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
CLN6-219ENST00000637329 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
CLN6-219ENST00000637329 D6R8Y8 96 aa11.11□□□□□ -0.63
CLN6-219ENST00000637329 SMIM17P0DL12 118 aa11.11□□□□□ -0.63
CLN6-219ENST00000637329 KRTAP10-11P60412 298 aa11.11□□□□□ -0.63
CLN6-219ENST00000637329 SNRPEP62304 92 aaKnown RBP11.11□□□□□ -0.63
CLN6-219ENST00000637329 ZNF876PQ49A33 203 aa11.11□□□□□ -0.63
CLN6-219ENST00000637329 POM121L12Q8N7R1 296 aa11.11□□□□□ -0.63
CLN6-219ENST00000637329 SMIM9A6NGZ8 99 aa11.1□□□□□ -0.63
CLN6-219ENST00000637329 HOXA5P20719 270 aa11.1□□□□□ -0.63
CLN6-219ENST00000637329 CKS2P33552 79 aa11.1□□□□□ -0.63
CLN6-219ENST00000637329 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
CLN6-219ENST00000637329 DNAH3Q8TD57 4116 aa11.09□□□□□ -0.63
CLN6-219ENST00000637329 A8MWV9 139 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms