RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 FAM74A7A6NL05 159 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 K7EP13 123 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 CIDEAO60543 219 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 RHOHQ15669 191 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 DPPA3Q6W0C5 159 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 Q86TA4 180 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 SLC25A29Q8N8R3 303 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 HIST1H2BAQ96A08 127 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 MSRB1Q9NZV6 116 aa10.2□□□□□ -0.78
CACNA1A-230ENST00000636768 PCLOQ9Y6V0 5065 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 TRBV6-4A0A1B0GX49 114 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 PGPEP1LA6NFU8 196 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 SMLR1H3BR10 107 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 CRYGDP07320 174 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 ASIPP42127 132 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 PTH2Q96A98 100 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 CYTL1Q9NRR1 136 aa10.19□□□□□ -0.78
CACNA1A-230ENST00000636768 MGST1P10620 155 aaKnown RBP10.18□□□□□ -0.78
CACNA1A-230ENST00000636768 TIRAPP58753 221 aa10.18□□□□□ -0.78
CACNA1A-230ENST00000636768 UBE2G1P62253 170 aa10.18□□□□□ -0.78
CACNA1A-230ENST00000636768 STOML3Q8TAV4 291 aa10.18□□□□□ -0.78
CACNA1A-230ENST00000636768 RYR1P21817 5038 aa10.18□□□□□ -0.78
CACNA1A-230ENST00000636768 IGKV3D-20A0A0C4DH25 116 aa10.17□□□□□ -0.78
CACNA1A-230ENST00000636768 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
CACNA1A-230ENST00000636768 B4DEV8 164 aa10.17□□□□□ -0.78
CACNA1A-230ENST00000636768 OR10J3Q5JRS4 329 aa10.17□□□□□ -0.78
CACNA1A-230ENST00000636768 CST9LP1Q5W188 147 aa10.17□□□□□ -0.78
CACNA1A-230ENST00000636768 FMC1Q96HJ9 113 aa10.17□□□□□ -0.78
CACNA1A-230ENST00000636768 TRAV8-6A0A0B4J262 113 aa10.16□□□□□ -0.78
CACNA1A-230ENST00000636768 LGALSLQ3ZCW2 172 aaPredicted RBP10.16□□□□□ -0.78
CACNA1A-230ENST00000636768 ZC2HC1AQ96GY0 325 aa10.16□□□□□ -0.78
CACNA1A-230ENST00000636768 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
CACNA1A-230ENST00000636768 ZFP30Q9Y2G7 519 aa10.16□□□□□ -0.78
CACNA1A-230ENST00000636768 A8MWV9 139 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 H3BVH4 76 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 M0R036 132 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 FHITP49789 147 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 ZNF345Q14585 488 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 KCNRGQ8N5I3 272 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 TCEAL7Q9BRU2 100 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 PARLQ9H300 379 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 IL36BQ9NZH7 164 aa10.15□□□□□ -0.78
CACNA1A-230ENST00000636768 A0A087WTM6 91 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 SH2D1AO60880 128 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 FUSP35637 526 aaKnown RBP eCLIP10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 AKR1C3P42330 323 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 PIK3CD-AS1Q5SR53 167 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 FAM162BQ5T6X4 162 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 CDPF1Q6NVV7 123 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 ZFP2Q6ZN57 461 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 SYT8Q8NBV8 401 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 FAM213BQ8TBF2 198 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CACNA1A-230ENST00000636768 KANTRA0A1W2PQU2 76 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 GRIFINA4D1Z8 144 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 KRBOX1C9JBD0 128 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 PSCAO43653 123 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 LELP1Q5T871 98 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 SLC7A5P1Q8MH63 180 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 SFT2D1Q8WV19 159 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 ZNF471Q9BX82 626 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 GTSF1LQ9H1H1 148 aa10.13□□□□□ -0.79
CACNA1A-230ENST00000636768 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 A0A1B0GV50 99 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 UMAD1C9J7I0 102 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 PAGE4O60829 102 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 LTAP01374 205 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 ARMS2P0C7Q2 107 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 SEC11BP0C7V7 166 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 CRIP1P50238 77 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 GAGE1Q13065 139 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 GAGE4Q13068 117 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 GAGE5Q13069 117 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 GAGE13Q4V321 117 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 Q6ZSN1 163 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 OR11H4Q8NGC9 324 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 JPT2Q9H910 190 aa10.12□□□□□ -0.79
CACNA1A-230ENST00000636768 TMSB15BA0A087X1C1 80 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 A0A0D9SG52 128 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 TRBV6-1A0A0K0K1D8 114 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 HMSDA8MTL9 139 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 RHODO00212 210 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 BCL2L11O43521 198 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 IGHV3-30P01768 117 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 IGHV3-33P01772 117 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 IGHV3-30-5P0DP03 117 aa10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 TPT1P13693 172 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-230ENST00000636768 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms