RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 MUC4Q99102 2169 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 SAA4P35542 130 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 PSMB2P49721 201 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 ANXA2RQ3ZCQ2 193 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 GLMPQ8WWB7 406 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 ITLN2Q8WWU7 325 aaPredicted RBP11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 DLX4Q92988 240 aaPredicted RBP11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 CLUHP3Q96NS8 147 aa11.35□□□□□ -0.59
THUMPD1-206ENST00000636554 CCL21O00585 134 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 CRYGDP07320 174 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 UBE2D1P51668 147 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 C11orf71Q6IPW1 123 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 F6UB75 175 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 CDIP1Q9H305 208 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 VPS13CQ709C8 3753 aa11.34□□□□□ -0.59
THUMPD1-206ENST00000636554 C11orf86A6NJI1 115 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 GNRH2O43555 120 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 ASIPP42127 132 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 CKS1BP61024 79 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 TMEM219Q86XT9 240 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 TGFAP01135 160 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 TSHBP01222 138 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 C9orf139Q6ZV77 190 aa11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
THUMPD1-206ENST00000636554 IGLV4-69A0A075B6H9 119 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 CD7P09564 240 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 TMEM238LA0A1B0GVL6 79 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 A6NJY4 79 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 Q6ZS46 218 aa11.32□□□□□ -0.6
THUMPD1-206ENST00000636554 CENPVL3A0A0U1RRI6 287 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 RNASE3P12724 160 aaKnown RBP11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 Q5PR19 223 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 ATRXP46100 2492 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 TSPEAR-AS2P59090 65 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 UBE2D3P61077 147 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 UBE2D2P62837 147 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 TP53TG1Q9Y2A0 90 aa11.31□□□□□ -0.6
THUMPD1-206ENST00000636554 MT-ATP8P03928 68 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 FBXL19-AS1Q494R0 122 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 OR10J6PQ8NGY7 276 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 A0A0J9YY99 117 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 ARL3P36405 182 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 TCTEX1D4Q5JR98 221 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 JPT2Q9H910 190 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
THUMPD1-206ENST00000636554 TCL1BO95988 128 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 UBE2E1P51965 193 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 NDUFA11Q86Y39 141 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 SOCS3O14543 225 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 ATP6V0E2Q8NHE4 81 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
THUMPD1-206ENST00000636554 XGP55808 180 aa11.28□□□□□ -0.6
THUMPD1-206ENST00000636554 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
THUMPD1-206ENST00000636554 IGHV3OR16-10A0A075B7F0 116 aa11.28□□□□□ -0.6
THUMPD1-206ENST00000636554 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
THUMPD1-206ENST00000636554 ADORA2A-AS1P86434 159 aa11.27□□□□□ -0.6
THUMPD1-206ENST00000636554 TRAV26-1A0A087WT03 109 aa11.27□□□□□ -0.61
THUMPD1-206ENST00000636554 IGIPA6NJ69 53 aa11.27□□□□□ -0.61
THUMPD1-206ENST00000636554 LINC00315P59091 139 aa11.27□□□□□ -0.61
THUMPD1-206ENST00000636554 COL6A6A6NMZ7 2263 aa11.27□□□□□ -0.61
THUMPD1-206ENST00000636554 A0A087WWL8 130 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 TRAV41A0A0B4J266 112 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 CFC1BP0CG36 223 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 CFC1P0CG37 223 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 IGHV3-30P01768 117 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 IGHV3-30-5P0DP03 117 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 TMEM170BQ5T4T1 132 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 Q6ZUT4 128 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 ZNRF2Q8NHG8 242 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 GEMIN7Q9H840 131 aaKnown RBP11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 COL12A1Q99715 3063 aa11.26□□□□□ -0.61
THUMPD1-206ENST00000636554 OVOL1O14753 267 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 IGHV3-11P01762 117 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 FAM19A4Q96LR4 140 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 SPTAN1Q13813 2472 aaKnown RBP11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 CRYBA4P53673 196 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 PMVKQ15126 192 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 SUMO4Q6EEV6 95 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 KIR2DL4Q99706 377 aa11.25□□□□□ -0.61
THUMPD1-206ENST00000636554 NPFFO15130 113 aa11.24□□□□□ -0.61
THUMPD1-206ENST00000636554 SRD5A1P18405 259 aa11.24□□□□□ -0.61
THUMPD1-206ENST00000636554 HERVK_113P61574 105 aa11.24□□□□□ -0.61
THUMPD1-206ENST00000636554 MED14OSP0DP75 135 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms