RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 C7orf77A4D0Y5 90 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 F5H768 121 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 K7EN84 100 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 NDUFS6O75380 124 aaKnown RBP6.84□□□□□ -1.31
LINC00339-210ENST00000635675 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 LINC01551Q86U37 167 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 CBLN2Q8IUK8 224 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 RASL10AQ92737 203 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
LINC00339-210ENST00000635675 MRPL16Q9NX20 251 aaKnown RBP6.84□□□□□ -1.31
LINC00339-210ENST00000635675 TRGV2A0A075B6R0 118 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 C9JCJ5 164 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 HOXA5P20719 270 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 RNF212Q495C1 297 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 FAM162BQ5T6X4 162 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 LGALS9CQ6DKI2 356 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 ZNF575Q86XF7 245 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 ISOC2Q96AB3 205 aa6.84□□□□□ -1.32
LINC00339-210ENST00000635675 MUC4Q99102 2169 aa6.83□□□□□ -1.32
LINC00339-210ENST00000635675 M0R2P5 195 aa6.83□□□□□ -1.32
LINC00339-210ENST00000635675 SH2D1AO60880 128 aa6.83□□□□□ -1.32
LINC00339-210ENST00000635675 LY6G6CO95867 125 aa6.83□□□□□ -1.32
LINC00339-210ENST00000635675 IGLV2-8P01709 118 aa6.83□□□□□ -1.32
LINC00339-210ENST00000635675 PNRC1Q12796 327 aaPredicted RBP6.83□□□□□ -1.32
LINC00339-210ENST00000635675 RNASE7Q9H1E1 156 aaKnown RBP6.83□□□□□ -1.32
LINC00339-210ENST00000635675 LYSTQ99698 3801 aa6.82□□□□□ -1.32
LINC00339-210ENST00000635675 ORM1P02763 201 aa6.82□□□□□ -1.32
LINC00339-210ENST00000635675 RNASE3P12724 160 aaKnown RBP6.82□□□□□ -1.32
LINC00339-210ENST00000635675 ERVFC1-1P60608 527 aa6.82□□□□□ -1.32
LINC00339-210ENST00000635675 RHEBQ15382 184 aa6.82□□□□□ -1.32
LINC00339-210ENST00000635675 C9orf85Q96MD7 179 aa6.82□□□□□ -1.32
LINC00339-210ENST00000635675 PLECQ15149 4684 aaKnown RBP6.81□□□□□ -1.32
LINC00339-210ENST00000635675 B4DEV8 164 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 MT-ND4LP03901 98 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 POM121L12Q8N7R1 296 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 OR10G8Q8NGN5 311 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 PTH2Q96A98 100 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 SFRP2Q96HF1 295 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 URGCP-MRPS24S4R325 110 aa6.81□□□□□ -1.32
LINC00339-210ENST00000635675 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 H3BNG1 76 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 GATCO43716 136 aaKnown RBP6.8□□□□□ -1.32
LINC00339-210ENST00000635675 IGHV3-53P01767 116 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 ASIPP42127 132 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 FHL2Q14192 279 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 ZNF876PQ49A33 203 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 VSIG2Q96IQ7 327 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 ALMS1Q8TCU4 4167 aa6.8□□□□□ -1.32
LINC00339-210ENST00000635675 TMSB15BA0A087X1C1 80 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 GRIFINA4D1Z8 144 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 P0DMU3 169 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 FAM231AP0DMU4 169 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 FAM231CP0DMU5 169 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
LINC00339-210ENST00000635675 RPL19P84098 196 aaKnown RBP6.79□□□□□ -1.32
LINC00339-210ENST00000635675 C15orf54Q8N8G6 183 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 DAZAP1Q96EP5 407 aaKnown RBP6.79□□□□□ -1.32
LINC00339-210ENST00000635675 SMIM12Q96EX1 92 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 IL36BQ9NZH7 164 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 LY96Q9Y6Y9 160 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 DNAH1Q9P2D7 4330 aa6.79□□□□□ -1.32
LINC00339-210ENST00000635675 TRAV4A0A0B4J268 109 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 A0A0J9YY99 117 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 NUDT3O95989 172 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 SLAQ13239 276 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 PIK3CD-AS1Q5SR53 167 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 NUDT10Q8NFP7 164 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 NUDT11Q96G61 164 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 SCRT2Q9NQ03 307 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 SMCO4Q9NRQ5 59 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 PRO0255Q9UI72 69 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 HHLA3Q9XRX5 114 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 NACAE9PAV3 2078 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 RYR2Q92736 4967 aa6.78□□□□□ -1.32
LINC00339-210ENST00000635675 A0A087WWC5 75 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 C19orf71A6NCJ1 209 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 H3BVH4 76 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 PPP1R2P9O14990 202 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 RS1O15537 224 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 P01737 135 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 GZMBP10144 247 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 CRYBA4P53673 196 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 CFAP126Q5VTH2 177 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 OSTCQ9NRP0 149 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 V9GYV3 84 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 RYR3Q15413 4870 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 SACSQ9NZJ4 4579 aa6.77□□□□□ -1.33
LINC00339-210ENST00000635675 TGIF2-C20orf24A0A0A6YYL0 155 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 TRGV4A0A0C4DH28 118 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 PAX4O43316 350 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 CIDEAO60543 219 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 CXCL1P09341 107 aa6.76□□□□□ -1.33
LINC00339-210ENST00000635675 S100PP25815 95 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms