RNA–Protein interactions for RNA: ENST00000634271.1

SMARCA2-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 4

Gene SMARCA2, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-218ENST00000634271 LINC01600Q96MT4 127 aa4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 C17orf77Q96MU5 243 aa4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 PCNX1Q96RV3 2341 aa4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 NAA38Q9BRA0 125 aaKnown RBP4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 MINOS1-NBL1R4GNA1 71 aa4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 HEATR1Q9H583 2144 aaKnown RBP4.42□□□□□ -1.7
SMARCA2-218ENST00000634271 TNCP24821 2201 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 TACC2O95359 2948 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 ABCA2Q9BZC7 2435 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 IGHV3-21A0A0B4J1V1 117 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 IGHV3-72A0A0B4J1Y9 119 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 A8MWV9 139 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SMKR1H3BMG3 65 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 TIMM23O14925 209 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 TSPAN13O95857 204 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SPINK8P0C7L1 97 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 CNTFRP26992 372 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SUMO2P61956 95 aaKnown RBP4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 BSPH1Q075Z2 132 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 ERCC8Q13216 396 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 FOXE3Q13461 319 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 EBI3Q14213 229 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 MRPL23Q16540 153 aaKnown RBP4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SPANXN1Q5VSR9 72 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 Q6ZUT4 128 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SYT8Q8NBV8 401 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 NEXN-AS1Q8NBZ9 246 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 FAM110DQ8TAY7 271 aaPredicted RBP4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 CFHR4Q92496 578 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 SCGB3A1Q96QR1 104 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 DPH3P1Q9H4G8 78 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 ERG28Q9UKR5 140 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 DCHS2Q6V1P9 2916 aa4.41□□□□□ -1.7
SMARCA2-218ENST00000634271 MED13LQ71F56 2210 aa4.4□□□□□ -1.7
SMARCA2-218ENST00000634271 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 TRAV21A0A0B4J279 112 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 ZNF815PA8K554 130 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 ODF3BA8MYP8 253 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 OVOL1O14753 267 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 BUB3O43684 328 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 LGALS1P09382 135 aaKnown RBP4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 ZNF688P0C7X2 276 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 HLA-DMBP28068 263 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 ZNF80P51504 273 aaPredicted RBP4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 FAM27E3Q08E93 113 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 DEFB109BQ30KR1 87 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 ZFAND6Q6FIF0 208 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 MORN3Q6PF18 240 aaPredicted RBP4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 POM121L12Q8N7R1 296 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 TIMD4Q96H15 378 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 FANCD2OSQ96PS1 177 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 TIMM17AQ99595 171 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 CCDC168Q8NDH2 2452 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 CNTRLQ7Z7A1 2325 aa4.4□□□□□ -1.71
SMARCA2-218ENST00000634271 TRBV7-1A0A0A6YYK4 115 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 IGKV3D-20A0A0C4DH25 116 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 IGHV7-4-1A0A0J9YVY3 117 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 C11orf86A6NJI1 115 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 IGHG4P01861 327 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 CD3EP07766 207 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 CTSGP08311 255 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 SCGB1C2P0DMR2 95 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 P0DMU3 169 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 FAM231AP0DMU4 169 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 FAM231CP0DMU5 169 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 COX6B1P14854 86 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 SRD5A1P18405 259 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 PRTN3P24158 256 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 COX7A1P24310 79 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 SRSF9Q13242 221 aaKnown RBP eCLIP4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 PRR31Q5SQ13 230 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 SH2D6Q7Z4S9 175 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 WFDC3Q8IUB2 231 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 C10orf126Q8N4M7 172 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 TEX29Q8N6K0 151 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 Q8N6K4 173 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 Q8TAT8 98 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 EEF1AKMT3Q96AZ1 226 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 LINC00477Q96M19 166 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 METTL26Q96S19 204 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 PRADC1Q9BSG0 188 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 ONECUT1Q9UBC0 465 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 UFC1Q9Y3C8 167 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 NIPBLQ6KC79 2804 aaeCLIP4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 NAV3Q8IVL0 2385 aa4.39□□□□□ -1.71
SMARCA2-218ENST00000634271 SPG11Q96JI7 2443 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 INTS1Q8N201 2190 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 A0A0B4J2C4 111 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 NXPH4O95158 308 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 CD7P09564 240 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 APELAP0DMC3 54 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 FXYD7P58549 80 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 GAGE5Q13069 117 aa4.38□□□□□ -1.71
SMARCA2-218ENST00000634271 GAGE6Q13070 117 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms