RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 PTH2Q96A98 100 aa7.16□□□□□ -1.26
SOX2-OT-257ENST00000630553 SMDT1Q9H4I9 107 aa7.16□□□□□ -1.26
SOX2-OT-257ENST00000630553 APOBP04114 4563 aaKnown RBP7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 SNURFLB1AK76 121 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 IFITM2Q01629 132 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 CENPWQ5EE01 88 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 TOR2AQ5JU69 321 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 BAGE2Q86Y30 109 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 C9orf85Q96MD7 179 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 SPXQ9BT56 116 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 SDF2L1Q9HCN8 221 aa7.15□□□□□ -1.26
SOX2-OT-257ENST00000630553 LRP1BQ9NZR2 4599 aa7.15□□□□□ -1.27
SOX2-OT-257ENST00000630553 IGKV3D-20A0A0C4DH25 116 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 SH2D1AO60880 128 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 HTN1P15515 57 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 EMP1P54849 157 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 CLLU1Q5K131 121 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 PIK3CD-AS1Q5SR53 167 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 MUC21Q5SSG8 566 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 RASL10AQ92737 203 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 FAM210BQ96KR6 192 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 PARLQ9H300 379 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 NOP10Q9NPE3 64 aaKnown RBP7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 GSN-AS1Q9NRJ2 163 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 LY96Q9Y6Y9 160 aa7.14□□□□□ -1.27
SOX2-OT-257ENST00000630553 C19orf71A6NCJ1 209 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 KRBOX1C9JBD0 128 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 SRP19P09132 144 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 RNASE3P12724 160 aaKnown RBP7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 GNG4P50150 75 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 DAD1P61803 113 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 MED9Q9NWA0 146 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 IL36BQ9NZH7 164 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 MDFICQ9P1T7 246 aa7.13□□□□□ -1.27
SOX2-OT-257ENST00000630553 Q6ZTI0 123 aa7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 SPATA12Q7Z6I5 190 aa7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 EIF5A2Q9GZV4 153 aaKnown RBP7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 BIN3Q9NQY0 253 aa7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 NAGKQ9UJ70 344 aa7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
SOX2-OT-257ENST00000630553 RAB19A4D1S5 217 aa7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 B4DEV8 164 aa7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 M0R2P5 195 aa7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 GNRH2O43555 120 aa7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 ATP5G1P05496 136 aa7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 RNF212Q495C1 297 aa7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 PCNPQ8WW12 178 aaKnown RBP7.11□□□□□ -1.27
SOX2-OT-257ENST00000630553 TRGV1A0A0A0MS02 117 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 H3BNG1 76 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 K7EN84 100 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 SNAI2O43623 268 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 NXPH4O95158 308 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 DEFB130BP0DP73 79 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 DEFB130AP0DP74 79 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 LORP23490 312 aaPredicted RBP7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 ASIPP42127 132 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 RAB14P61106 215 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 FAM74A3Q4VXF1 159 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 C6orf223Q8N319 242 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 SSBP4Q9BWG4 385 aaPredicted RBP7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
SOX2-OT-257ENST00000630553 TRAV4A0A0B4J268 109 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 GAGE12BA1L429 117 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 PGPEP1LA6NFU8 196 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 C9JQL5 133 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 CIDEAO60543 219 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 GAGE7O76087 117 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 ORM1P02763 201 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 OR5AL1P0C617 328 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 GAGE12FP0CL80 117 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 GAGE12GP0CL81 117 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 GAGE12IP0CL82 117 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 SRSF3P84103 164 aaKnown RBP7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 PEA15Q15121 130 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 FAM231DQ6ZW35 169 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 OCC1Q8TAD7 63 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 SMIM7Q9BQ49 75 aa7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 MRPL16Q9NX20 251 aaKnown RBP7.09□□□□□ -1.27
SOX2-OT-257ENST00000630553 M0R036 132 aa7.08□□□□□ -1.28
SOX2-OT-257ENST00000630553 IGLC6P0CF74 106 aa7.08□□□□□ -1.28
SOX2-OT-257ENST00000630553 HTN3P15516 51 aa7.08□□□□□ -1.28
SOX2-OT-257ENST00000630553 PRR27Q6MZM9 219 aa7.08□□□□□ -1.28
SOX2-OT-257ENST00000630553 LINC01551Q86U37 167 aa7.08□□□□□ -1.28
SOX2-OT-257ENST00000630553 C15orf53Q8NAA6 179 aa7.08□□□□□ -1.28
SOX2-OT-257ENST00000630553 TRGV2A0A075B6R0 118 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 ZNF727A8MUV8 499 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 H3BVH4 76 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 RS1O15537 224 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 ARMS2P0C7Q2 107 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 HOXA5P20719 270 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 RPL19P84098 196 aaKnown RBP7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 CT83Q5H943 113 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 CNFNQ9BYD5 112 aa7.07□□□□□ -1.28
SOX2-OT-257ENST00000630553 MYCBP2O75592 4640 aa7.06□□□□□ -1.28
SOX2-OT-257ENST00000630553 P01737 135 aa7.06□□□□□ -1.28
SOX2-OT-257ENST00000630553 MGST1P10620 155 aaKnown RBP7.06□□□□□ -1.28
SOX2-OT-257ENST00000630553 S100A4P26447 101 aaKnown RBP7.06□□□□□ -1.28
SOX2-OT-257ENST00000630553 SLAQ13239 276 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms