RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 C20orf144Q9BQM9 153 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 SNHG12Q9BXW3 62 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 A0A087X0K7 114 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 LGALS9O00182 355 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 HLA-DMBP28068 263 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 NF1P21359 2839 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 KLK9Q2XQG4 91 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 SPATA45Q537H7 98 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 Q6ZN92 141 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 ZNF575Q86XF7 245 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 Q8TAT8 98 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 LINC01587Q99440 93 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 KLK9Q9UKQ9 250 aa9.42□□□□□ -0.9
SYNGAP1-207ENST00000628646 RNASE4P34096 147 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 CRIP1P50238 77 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 PRR31Q5SQ13 230 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 SYT8Q8NBV8 401 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 ZFAND3Q9H8U3 227 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 F6UB75 175 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 DEFB114Q30KQ6 69 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 MYOZ3Q8TDC0 251 aa9.41□□□□□ -0.9
SYNGAP1-207ENST00000628646 PRSS1P07477 247 aa9.4□□□□□ -0.9
SYNGAP1-207ENST00000628646 ARMS2P0C7Q2 107 aa9.4□□□□□ -0.9
SYNGAP1-207ENST00000628646 XCL2Q9UBD3 114 aa9.4□□□□□ -0.9
SYNGAP1-207ENST00000628646 OTOGQ6ZRI0 2925 aa9.4□□□□□ -0.9
SYNGAP1-207ENST00000628646 LEPP41159 167 aa9.4□□□□□ -0.9
SYNGAP1-207ENST00000628646 F5H697 171 aa9.4□□□□□ -0.91
SYNGAP1-207ENST00000628646 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.91
SYNGAP1-207ENST00000628646 C8orf49Q96NF6 230 aa9.4□□□□□ -0.91
SYNGAP1-207ENST00000628646 NXT2Q9NPJ8 142 aaKnown RBP9.4□□□□□ -0.91
SYNGAP1-207ENST00000628646 EDN2P20800 178 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 PET117Q6UWS5 81 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 ERCC8Q13216 396 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 BRI3O95415 125 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
SYNGAP1-207ENST00000628646 MDFIQ99750 246 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 CITED1Q99966 193 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 TRAV25A0A0B4J276 109 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 MGPP08493 103 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 DEFB1P60022 68 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 GATD1Q8NB37 220 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 VGLL1Q99990 258 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 RRN3P1Q2M238 152 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 C19orf54Q5BKX5 351 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 FAM104BQ5XKR9 115 aa9.38□□□□□ -0.91
SYNGAP1-207ENST00000628646 SMAD5-AS1Q9Y6J3 95 aa9.37□□□□□ -0.91
SYNGAP1-207ENST00000628646 CD7P09564 240 aa9.37□□□□□ -0.91
SYNGAP1-207ENST00000628646 LINC00482Q8N8I6 264 aa9.37□□□□□ -0.91
SYNGAP1-207ENST00000628646 RNF152Q8N8N0 203 aa9.37□□□□□ -0.91
SYNGAP1-207ENST00000628646 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
SYNGAP1-207ENST00000628646 ZNF25P17030 456 aaPredicted RBP9.37□□□□□ -0.91
SYNGAP1-207ENST00000628646 MUC21A0A0G2JKD1 596 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 MUC21A0A140T8X8 626 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 COX8CQ7Z4L0 72 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 AGPAT4-IT1Q9H0P7 198 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 TRAV9-2A0A087WT02 112 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 TRAV12-3A0A0B4J271 114 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 HBDP02042 147 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 DEFB125Q8N687 156 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 C1QTNF4Q9BXJ3 329 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 D6R8Y8 96 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 ATP5LO75964 103 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 PMCHL2Q9BQD1 86 aa9.36□□□□□ -0.91
SYNGAP1-207ENST00000628646 MXRA5Q9NR99 2828 aa9.35□□□□□ -0.91
SYNGAP1-207ENST00000628646 M0R381 172 aa9.35□□□□□ -0.91
SYNGAP1-207ENST00000628646 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
SYNGAP1-207ENST00000628646 TRAV12-2A0A075B6T6 113 aa9.34□□□□□ -0.91
SYNGAP1-207ENST00000628646 APOC4P55056 127 aa9.34□□□□□ -0.91
SYNGAP1-207ENST00000628646 KRTAP10-3P60369 221 aa9.34□□□□□ -0.91
SYNGAP1-207ENST00000628646 SLC25A34Q6PIV7 304 aa9.34□□□□□ -0.91
SYNGAP1-207ENST00000628646 AMN1Q8IY45 258 aa9.34□□□□□ -0.91
SYNGAP1-207ENST00000628646 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.92
SYNGAP1-207ENST00000628646 C9orf47Q6ZRZ4 202 aa9.34□□□□□ -0.92
SYNGAP1-207ENST00000628646 CRXO43186 299 aaPredicted RBP9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 HTN3P15516 51 aa9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 INSP01308 110 aa9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 LINC01549A6NIU2 74 aa9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 H3BVH4 76 aa9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 NUDT3O95989 172 aa9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 MRPL52Q86TS9 123 aaKnown RBP9.33□□□□□ -0.92
SYNGAP1-207ENST00000628646 MAP6D1Q9H9H5 199 aa9.32□□□□□ -0.92
SYNGAP1-207ENST00000628646 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
SYNGAP1-207ENST00000628646 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
SYNGAP1-207ENST00000628646 OR2K2Q8NGT1 345 aa9.32□□□□□ -0.92
SYNGAP1-207ENST00000628646 VPS25Q9BRG1 176 aa9.32□□□□□ -0.92
SYNGAP1-207ENST00000628646 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
SYNGAP1-207ENST00000628646 IGHV1-24A0A0C4DH33 117 aa9.31□□□□□ -0.92
SYNGAP1-207ENST00000628646 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
SYNGAP1-207ENST00000628646 K7EQG2 157 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms