RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 LRCOL1A6NCL2 159 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 CXorf1O96002 111 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 RNASE3P12724 160 aaKnown RBP8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 GCSHP23434 173 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 ZFP69Q49AA0 526 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 ZNF506Q5JVG8 444 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 PIK3CD-AS1Q5SR53 167 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 SAPCD1Q5SSQ6 148 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 LELP1Q5T871 98 aa8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 NTN5Q8WTR8 489 aaPredicted RBP8.36□□□□□ -1.07
SOX2-OT-247ENST00000628347 A0A1W2PRE2 83 aa8.35□□□□□ -1.07
SOX2-OT-247ENST00000628347 PGPEP1LA6NFU8 196 aa8.35□□□□□ -1.07
SOX2-OT-247ENST00000628347 MGST1P10620 155 aaKnown RBP8.35□□□□□ -1.07
SOX2-OT-247ENST00000628347 OR10J3Q5JRS4 329 aa8.35□□□□□ -1.07
SOX2-OT-247ENST00000628347 ACTR3CQ9C0K3 210 aaPredicted RBP8.35□□□□□ -1.07
SOX2-OT-247ENST00000628347 GTSF1LQ9H1H1 148 aa8.35□□□□□ -1.07
SOX2-OT-247ENST00000628347 PSCAO43653 123 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 PTTG1O95997 202 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 LAGE3Q14657 143 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 Q5VSD8 79 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 ZFP2Q6ZN57 461 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 PRNTQ86SH4 94 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 FRZBQ92765 325 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 MED28Q9H204 178 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 SH3BGRL3Q9H299 93 aa8.34□□□□□ -1.07
SOX2-OT-247ENST00000628347 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 GIPP09681 153 aaPredicted RBP8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 LINC00694P0DN24 101 aa8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 TMEM70Q9BUB7 260 aa8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 PARLQ9H300 379 aa8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGKV3D-20A0A0C4DH25 116 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 CTXND1A0A1B0GTU2 59 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 A8MWV9 139 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 Q5BKY6 102 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 Q8N814 137 aa8.32□□□□□ -1.08
SOX2-OT-247ENST00000628347 RNF222A6NCQ9 220 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 FABP5P3A8MUU1 101 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 ZNF726P1Q15940 193 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 DNLZQ5SXM8 178 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 RPL7L1Q6DKI1 246 aaKnown RBP8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 UFSP1Q6NVU6 142 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 Q6ZSN1 163 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 COX8CQ7Z4L0 72 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 INO80EQ8NBZ0 244 aaPredicted RBP8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 NKX6-2Q9C056 277 aaPredicted RBP8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 Q9HAA7 133 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 IL36BQ9NZH7 164 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 ARL2-SNX15V9GYD0 113 aa8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 SRRM2Q9UQ35 2752 aaKnown RBP8.31□□□□□ -1.08
SOX2-OT-247ENST00000628347 BORCS7-ASMTA0A0B4J1R7 106 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 TRAV34A0A0B4J273 112 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 PEX7O00628 323 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 C1QBP02746 253 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 S100A4P26447 101 aaKnown RBP8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 ASIPP42127 132 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 Q86TA4 180 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 HIST1H2BAQ96A08 127 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 TM2D2Q9BX73 214 aa8.3□□□□□ -1.08
SOX2-OT-247ENST00000628347 IFNA7P01567 189 aa8.29□□□□□ -1.08
SOX2-OT-247ENST00000628347 A0A087WWC5 75 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 FAM74A7A6NL05 159 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 B4DEV8 164 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 KRBOX1C9JBD0 128 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 FAM229AH3BQW9 127 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 RHODO00212 210 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 FGF8P55075 233 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 GAGE1Q13065 139 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 GAGE4Q13068 117 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 GAGE5Q13069 117 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 LGALSLQ3ZCW2 172 aaPredicted RBP8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 ZFP30Q9Y2G7 519 aa8.28□□□□□ -1.08
SOX2-OT-247ENST00000628347 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 FXYD6-FXYD2A0A087WZ82 144 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 TRBV6-1A0A0K0K1D8 114 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 CRIP1P50238 77 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 UBE2G2P60604 165 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 AKR1C8PQ5T2L2 129 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 C14orf178Q8N769 122 aaPredicted RBP8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 ZC2HC1AQ96GY0 325 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 JPT2Q9H910 190 aa8.27□□□□□ -1.09
SOX2-OT-247ENST00000628347 H3BVH4 76 aa8.26□□□□□ -1.09
SOX2-OT-247ENST00000628347 FHITP49789 147 aa8.26□□□□□ -1.09
SOX2-OT-247ENST00000628347 Q8N3U1 123 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms