RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 MDFICQ9P1T7 246 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BKO60814 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 APCSP02743 223 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BJP06899 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BOP23527 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BBP33778 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BDP58876 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 KRTAP10-11P60412 298 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BCP62807 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST2H2BEQ16778 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BHQ93079 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 C9orf85Q96MD7 179 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BNQ99877 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 HIST1H2BMQ99879 126 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 PHLDA3Q9Y5J5 127 aa18.13■□□□□ 0.49
CAPNS1-215ENST00000628018 SPANXN1Q5VSR9 72 aa18.12■□□□□ 0.49
CAPNS1-215ENST00000628018 CSNK1G2-AS1Q8NCQ2 148 aa18.12■□□□□ 0.49
CAPNS1-215ENST00000628018 CMYA5Q8N3K9 4069 aa18.12■□□□□ 0.49
CAPNS1-215ENST00000628018 SPRY2O43597 315 aa18.11■□□□□ 0.49
CAPNS1-215ENST00000628018 CSTL1Q9H114 145 aa18.11■□□□□ 0.49
CAPNS1-215ENST00000628018 HTN1P15515 57 aa18.1■□□□□ 0.49
CAPNS1-215ENST00000628018 TMEM208Q9BTX3 173 aa18.1■□□□□ 0.49
CAPNS1-215ENST00000628018 ZMAT5Q9UDW3 170 aaKnown RBP18.1■□□□□ 0.49
CAPNS1-215ENST00000628018 NXPH4O95158 308 aa18.09■□□□□ 0.49
CAPNS1-215ENST00000628018 PRM2P04554 102 aa18.09■□□□□ 0.49
CAPNS1-215ENST00000628018 TMEM191AQ9H0A3 160 aa18.09■□□□□ 0.49
CAPNS1-215ENST00000628018 PKD1L1Q8TDX9 2849 aa18.09■□□□□ 0.49
CAPNS1-215ENST00000628018 LOC102724200A0A096LPH7 203 aaPredicted RBP18.08■□□□□ 0.49
CAPNS1-215ENST00000628018 KIAA1644Q3SXP7 199 aa18.08■□□□□ 0.49
CAPNS1-215ENST00000628018 GOLT1BQ9Y3E0 138 aa18.08■□□□□ 0.49
CAPNS1-215ENST00000628018 M0R381 172 aa18.08■□□□□ 0.48
CAPNS1-215ENST00000628018 IGHV3OR16-12A0A075B7B8 117 aa18.07■□□□□ 0.48
CAPNS1-215ENST00000628018 G3V4G9 280 aa18.07■□□□□ 0.48
CAPNS1-215ENST00000628018 SAMD5Q5TGI4 173 aa18.07■□□□□ 0.48
CAPNS1-215ENST00000628018 DMRTA1Q5VZB9 504 aa18.07■□□□□ 0.48
CAPNS1-215ENST00000628018 MUC4Q99102 2169 aa18.07■□□□□ 0.48
CAPNS1-215ENST00000628018 FAM104BQ5XKR9 115 aa18.06■□□□□ 0.48
CAPNS1-215ENST00000628018 KIR2DL5BA0A0G2JN68 375 aa18.05■□□□□ 0.48
CAPNS1-215ENST00000628018 KIR2DL5BA0A0G2JPC4 375 aa18.05■□□□□ 0.48
CAPNS1-215ENST00000628018 ZNF705AQ6ZN79 300 aaPredicted RBP18.05■□□□□ 0.48
CAPNS1-215ENST00000628018 KIR2DL5AQ8N109 375 aa18.05■□□□□ 0.48
CAPNS1-215ENST00000628018 C11orf72Q8NBR9 251 aa18.05■□□□□ 0.48
CAPNS1-215ENST00000628018 KIR2DL5BQ8NHK3 375 aa18.05■□□□□ 0.48
CAPNS1-215ENST00000628018 ZNF415Q09FC8 603 aa18.04■□□□□ 0.48
CAPNS1-215ENST00000628018 AMN1Q8IY45 258 aa18.04■□□□□ 0.48
CAPNS1-215ENST00000628018 IGHV4-30-4P0DP06 118 aa18.03■□□□□ 0.48
CAPNS1-215ENST00000628018 AZU1P20160 251 aa18.03■□□□□ 0.48
CAPNS1-215ENST00000628018 EVI2AP22794 236 aa18.03■□□□□ 0.48
CAPNS1-215ENST00000628018 SMIM15Q7Z3B0 74 aa18.03■□□□□ 0.48
CAPNS1-215ENST00000628018 GSN-AS1Q9NRJ2 163 aa18.03■□□□□ 0.48
CAPNS1-215ENST00000628018 SRIP30626 198 aa18.02■□□□□ 0.47
CAPNS1-215ENST00000628018 APOC4P55056 127 aa18.02■□□□□ 0.47
CAPNS1-215ENST00000628018 RNF185Q96GF1 192 aa18.02■□□□□ 0.47
CAPNS1-215ENST00000628018 ALKBH7Q9BT30 221 aaPredicted RBP18.02■□□□□ 0.47
CAPNS1-215ENST00000628018 S100A6P06703 90 aa18.01■□□□□ 0.47
CAPNS1-215ENST00000628018 RAB4AP20338 218 aa18.01■□□□□ 0.47
CAPNS1-215ENST00000628018 NDUFA6P56556 154 aa18.01■□□□□ 0.47
CAPNS1-215ENST00000628018 MRPL51Q4U2R6 128 aaKnown RBP18.01■□□□□ 0.47
CAPNS1-215ENST00000628018 SYT8Q8NBV8 401 aa18.01■□□□□ 0.47
CAPNS1-215ENST00000628018 RNASE8Q8TDE3 154 aaKnown RBP18.01■□□□□ 0.47
CAPNS1-215ENST00000628018 TMEM263Q8WUH6 116 aaKnown RBP18■□□□□ 0.47
CAPNS1-215ENST00000628018 RCHY1Q96PM5 261 aa18■□□□□ 0.47
CAPNS1-215ENST00000628018 PTH2Q96A98 100 aa17.99■□□□□ 0.47
CAPNS1-215ENST00000628018 AP1S3Q96PC3 154 aa17.99■□□□□ 0.47
CAPNS1-215ENST00000628018 SPXQ9BT56 116 aa17.99■□□□□ 0.47
CAPNS1-215ENST00000628018 A8MZ25 164 aa17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 IL17DQ8TAD2 202 aa17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 M0R2P5 195 aa17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 ZNF876PQ49A33 203 aa17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 C14orf178Q8N769 122 aaPredicted RBP17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 DPH3P1Q9H4G8 78 aa17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 U3KQK5 164 aa17.98■□□□□ 0.47
CAPNS1-215ENST00000628018 C5orf52A6NGY3 159 aa17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 SNRPEP62304 92 aaKnown RBP17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 Q0VG73 95 aa17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 KRTAP21-3Q3LHN1 58 aa17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 COA6Q5JTJ3 125 aaKnown RBP17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 PIK3CD-AS1Q5SR53 167 aa17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 JPT2Q9H910 190 aa17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 KIF25-AS1Q9Y6Z4 181 aa17.97■□□□□ 0.47
CAPNS1-215ENST00000628018 RRN3P1Q2M238 152 aa17.96■□□□□ 0.47
CAPNS1-215ENST00000628018 OR10J3Q5JRS4 329 aa17.96■□□□□ 0.47
CAPNS1-215ENST00000628018 C16orf74Q96GX8 76 aa17.96■□□□□ 0.47
CAPNS1-215ENST00000628018 D6R8Y8 96 aa17.95■□□□□ 0.46
CAPNS1-215ENST00000628018 UBE2CO00762 179 aa17.95■□□□□ 0.46
CAPNS1-215ENST00000628018 C18orf32Q8TCD1 76 aa17.95■□□□□ 0.46
CAPNS1-215ENST00000628018 ORMDL3Q8N138 153 aa17.94■□□□□ 0.46
CAPNS1-215ENST00000628018 PLAC8L1A1L4L8 177 aa17.93■□□□□ 0.46
CAPNS1-215ENST00000628018 LINC00315P59091 139 aa17.93■□□□□ 0.46
CAPNS1-215ENST00000628018 PPBPP02775 128 aa17.93■□□□□ 0.46
CAPNS1-215ENST00000628018 CKS2P33552 79 aa17.93■□□□□ 0.46
CAPNS1-215ENST00000628018 POM121L12Q8N7R1 296 aa17.93■□□□□ 0.46
CAPNS1-215ENST00000628018 X6R8D5 127 aa17.93■□□□□ 0.46
CAPNS1-215ENST00000628018 SMIM17P0DL12 118 aa17.92■□□□□ 0.46
CAPNS1-215ENST00000628018 HOXA5P20719 270 aa17.92■□□□□ 0.46
CAPNS1-215ENST00000628018 DNAH3Q8TD57 4116 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 SMKR1H3BMG3 65 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 CRYGDP07320 174 aa17.91■□□□□ 0.46
CAPNS1-215ENST00000628018 DAZ2Q13117 558 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms