RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 CYTL1Q9NRR1 136 aa8.19□□□□□ -1.1
UBR1-212ENST00000627960 ARL2-SNX15V9GYD0 113 aa8.19□□□□□ -1.1
UBR1-212ENST00000627960 A0A087WTM6 91 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 IGHV3-73A0A0B4J1V6 119 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 FAM74A7A6NL05 159 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 FABP5P3A8MUU1 101 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 PEX7O00628 323 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 CRYGDP07320 174 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 RHOHQ15669 191 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 Q8N1X5 172 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 C10orf126Q8N4M7 172 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 HIST1H2BAQ96A08 127 aa8.18□□□□□ -1.1
UBR1-212ENST00000627960 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
UBR1-212ENST00000627960 ARPC5O15511 151 aa8.17□□□□□ -1.1
UBR1-212ENST00000627960 Q86TA4 180 aa8.17□□□□□ -1.1
UBR1-212ENST00000627960 TRAV8-6A0A0B4J262 113 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 MAP1LC3B2A6NCE7 125 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 MGST1P10620 155 aaKnown RBP8.16□□□□□ -1.1
UBR1-212ENST00000627960 S100A4P26447 101 aaKnown RBP8.16□□□□□ -1.1
UBR1-212ENST00000627960 FUSP35637 526 aaKnown RBP eCLIP8.16□□□□□ -1.1
UBR1-212ENST00000627960 ASIPP42127 132 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 CRIP1P50238 77 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 LINC01556Q5JQF7 62 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 PIK3CD-AS1Q5SR53 167 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 CDPF1Q6NVV7 123 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 COX8CQ7Z4L0 72 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 MAP1LC3BQ9GZQ8 125 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 BOLA1Q9Y3E2 137 aa8.16□□□□□ -1.1
UBR1-212ENST00000627960 A8MWV9 139 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 B4DEV8 164 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 SMLR1H3BR10 107 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 LGALSLQ3ZCW2 172 aaPredicted RBP8.15□□□□□ -1.1
UBR1-212ENST00000627960 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 DNLZQ5SXM8 178 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 LELP1Q5T871 98 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 Q6ZSN1 163 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 ATP6V0E2Q8NHE4 81 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 ZC2HC1AQ96GY0 325 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 FMC1Q96HJ9 113 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 PARLQ9H300 379 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 SCRT2Q9NQ03 307 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 IL36BQ9NZH7 164 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 ZFP30Q9Y2G7 519 aa8.15□□□□□ -1.1
UBR1-212ENST00000627960 IBA57-AS1B1ANH7 110 aa8.14□□□□□ -1.11
UBR1-212ENST00000627960 KRBOX1C9JBD0 128 aa8.14□□□□□ -1.11
UBR1-212ENST00000627960 FHITP49789 147 aa8.14□□□□□ -1.11
UBR1-212ENST00000627960 KCNRGQ8N5I3 272 aa8.14□□□□□ -1.11
UBR1-212ENST00000627960 STOML3Q8TAV4 291 aa8.14□□□□□ -1.11
UBR1-212ENST00000627960 TRBV6-1A0A0K0K1D8 114 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 M0R036 132 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 SH2D1AO60880 128 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 UBE2G1P62253 170 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 ZNF345Q14585 488 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 DMRTA1Q5VZB9 504 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 CST9LP1Q5W188 147 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 UFSP1Q6NVU6 142 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 TCEAL7Q9BRU2 100 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 JPT2Q9H910 190 aa8.13□□□□□ -1.11
UBR1-212ENST00000627960 GRIFINA4D1Z8 144 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 GAGE12JA6NER3 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 H3BVH4 76 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 LTAP01374 205 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 IGHV3-30P01768 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 IGHV3-33P01772 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 LINC00694P0DN24 101 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 IGHV3-30-3P0DP02 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 IGHV3-30-5P0DP03 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 GAGE1Q13065 139 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 GAGE4Q13068 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 GAGE5Q13069 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 ZNF674Q2M3X9 581 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 GAGE13Q4V321 117 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 FAM162BQ5T6X4 162 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 SAMD10Q9BYL1 202 aa8.12□□□□□ -1.11
UBR1-212ENST00000627960 LRCOL1A6NCL2 159 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 HMSDA8MTL9 139 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 PSCAO43653 123 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 PAGE4O60829 102 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 SEC11BP0C7V7 166 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 AKR1C3P42330 323 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 XGP55808 180 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 LINC01559Q495D7 138 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 C14orf178Q8N769 122 aaPredicted RBP8.11□□□□□ -1.11
UBR1-212ENST00000627960 OR11H4Q8NGC9 324 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 Q9UF83 564 aa8.11□□□□□ -1.11
UBR1-212ENST00000627960 A0A0D9SG52 128 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 UMAD1C9J7I0 102 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 RHODO00212 210 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 GCSHP23434 173 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 FAM213BQ8TBF2 198 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 SFRP2Q96HF1 295 aa8.1□□□□□ -1.11
UBR1-212ENST00000627960 Q9HAA7 133 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms