RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ABHD14BQ96IU4 210 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 PHB2Q99623 299 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 RHPN1-AS1Q9BWJ2 59 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 MS4A6AQ9H2W1 248 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TVP23BQ9NYZ1 205 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 KLK9Q9UKQ9 250 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 LY96Q9Y6Y9 160 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 V9GYS6 101 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TMSB15BA0A087X1C1 80 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TRAV14DV4A0A0A6YYC5 116 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TRAV26-2A0A0B4J265 109 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 A0A0J9YY99 117 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TMEM30CPA0ZSE6 113 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 A6NIN4 97 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 C9JCJ5 164 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 H0YJX3 145 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 NDUFA4O00483 81 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 YPEL1O60688 119 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 ADAP1O75689 374 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 SULT1C4O75897 302 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 HBZP02008 142 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TTRP02766 147 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 GYPBP06028 91 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 SAA2P0DJI9 122 aaPredicted RBP0.69□□□□□ -2.3
VBP1-204ENST00000625964 HIST1H1BP16401 226 aaKnown RBP0.69□□□□□ -2.3
VBP1-204ENST00000625964 EVI2AP22794 236 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 NPPCP23582 126 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 OMPP47874 163 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 SERPINB10P48595 397 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 POLR2JP52435 117 aaKnown RBP0.69□□□□□ -2.3
VBP1-204ENST00000625964 MRPS25P82663 173 aaKnown RBP0.69□□□□□ -2.3
VBP1-204ENST00000625964 FLOT2Q14254 428 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 OGFRL1Q5TC84 451 aaPredicted RBP0.69□□□□□ -2.3
VBP1-204ENST00000625964 LINC01590Q5TEZ4 76 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 SPINK6Q6UWN8 80 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 TMED4Q7Z7H5 227 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 C1orf158Q8N1D5 194 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 FAM24BQ8N5W8 94 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 OTOSQ8NHW6 89 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 LRRC20Q8TCA0 184 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 THEM6Q8WUY1 208 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 DGCR14Q96DF8 476 aaKnown RBP0.69□□□□□ -2.3
VBP1-204ENST00000625964 YPEL2Q96QA6 119 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 MIEN1Q9BRT3 115 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 CYSTM1Q9H1C7 97 aa0.69□□□□□ -2.3
VBP1-204ENST00000625964 A0A096LPF7 62 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 IGKV1-9A0A0C4DH69 117 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 IBA57-AS1B1ANH7 110 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 AIPO00170 330 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 COPEO14579 308 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 DHFRP00374 187 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 CRYGAP11844 174 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 IDO1P14902 403 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 SPI1P17947 270 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 CCL1P22362 96 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 OR10A3P58181 314 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 FXYD7P58549 80 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 CNBPP62633 177 aaKnown RBP0.68□□□□□ -2.3
VBP1-204ENST00000625964 SELENOWP63302 87 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 MT1HP80294 61 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 WFDC2Q14508 124 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 INSL4Q14641 139 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 RPL39P5Q59GN2 51 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 LYPD5Q6UWN5 251 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 LHFPL1Q86WI0 220 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 C7orf50Q9BRJ6 194 aaKnown RBP0.68□□□□□ -2.3
VBP1-204ENST00000625964 LINC00467Q9BRT7 94 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 MROQ9BYG7 248 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 TAF9BQ9HBM6 251 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 COMMD9Q9P000 198 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 RABAC1Q9UI14 185 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 JPT1Q9UK76 154 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 TRAPPC2LQ9UL33 140 aa0.68□□□□□ -2.3
VBP1-204ENST00000625964 UTP11Q9Y3A2 253 aaKnown RBP0.68□□□□□ -2.3
VBP1-204ENST00000625964 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 IGKV2-40A0A087WW87 121 aaPredicted RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 E7EUB6 86 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 J3QRK9 145 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 ITGB1BP1O14713 200 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 ATP8B1O43520 1251 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 CREBL2O60519 120 aaPredicted RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 DCTN3O75935 186 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 OR7C1O76099 320 aaPredicted RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 IGKV2D-40P01614 121 aaPredicted RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 APOA2P02652 100 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 PRM2P04554 102 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 ISG15P05161 165 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 DEFA4P12838 97 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 HLA-DRB4P13762 266 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 NUP62P37198 522 aaPredicted RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 PSMD7P51665 324 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 B2MP61769 119 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 MRPS15P82914 257 aaKnown RBP0.67□□□□□ -2.3
VBP1-204ENST00000625964 KISS1Q15726 138 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 VMA21Q3ZAQ7 101 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 PSMG4Q5JS54 123 aa0.67□□□□□ -2.3
VBP1-204ENST00000625964 C10orf55Q5SWW7 151 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms