RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 PYGO2Q9BRQ0 406 aa9.07□□□□□ -0.96
PNKP-217ENST00000625216 AMBPP02760 352 aa9.06□□□□□ -0.96
PNKP-217ENST00000625216 ORM1P02763 201 aa9.06□□□□□ -0.96
PNKP-217ENST00000625216 MUC21Q5SSG8 566 aa9.06□□□□□ -0.96
PNKP-217ENST00000625216 KCNIP4Q6PIL6 250 aa9.06□□□□□ -0.96
PNKP-217ENST00000625216 NAGKQ9UJ70 344 aa9.06□□□□□ -0.96
PNKP-217ENST00000625216 GOLT1BQ9Y3E0 138 aa9.06□□□□□ -0.96
PNKP-217ENST00000625216 TRBV24-1A0A075B6N3 115 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 HIGD1CA8MV81 97 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 IGLL5B9A064 214 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
PNKP-217ENST00000625216 ANXA2RQ3ZCQ2 193 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 Q6ZTC4 211 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 NUP35Q8NFH5 326 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 GFRA4Q9GZZ7 299 aa9.05□□□□□ -0.96
PNKP-217ENST00000625216 TRAV9-1A0A075B6T8 112 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 TEX48A0A1B0GUV7 120 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 INSP01308 110 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 IGLC6P0CF74 106 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 SPART-AS1P0CW21 52 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 C12orf74Q32Q52 190 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 PGLYRP4Q96LB8 373 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 NAT8BQ9UHF3 227 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 APLNQ9ULZ1 77 aa9.04□□□□□ -0.96
PNKP-217ENST00000625216 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 XKRY2A2RUG3 117 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 FAM231BA6NCW3 169 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 SPINK4O60575 86 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 TYMSP04818 313 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 CTRLP40313 264 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 C1orf158Q8N1D5 194 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 FER1L6-AS1Q8NA97 138 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 FAM210BQ96KR6 192 aa9.03□□□□□ -0.96
PNKP-217ENST00000625216 KMT2AQ03164 3969 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 IGHV1OR15-1A0A075B7D0 117 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 DEFB131BA0A096LNP1 70 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 GNRH2O43555 120 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 RAB5AP20339 215 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
PNKP-217ENST00000625216 MRPL54Q6P161 138 aaKnown RBP9.02□□□□□ -0.97
PNKP-217ENST00000625216 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 TP53TG3Q9ULZ0 132 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 CELA1Q9UNI1 258 aa9.02□□□□□ -0.97
PNKP-217ENST00000625216 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 H3BVH4 76 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 RRN3P1Q2M238 152 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 TDRG1Q3Y452 100 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 DNLZQ5SXM8 178 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 LYZL1Q6UWQ5 148 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 FAM159AQ6UWV7 190 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 C20orf144Q9BQM9 153 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 TMEM208Q9BTX3 173 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 DNAH10Q8IVF4 4471 aa9.01□□□□□ -0.97
PNKP-217ENST00000625216 MUC4Q99102 2169 aa9□□□□□ -0.97
PNKP-217ENST00000625216 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
PNKP-217ENST00000625216 MUC21A0A0G2JKD1 596 aa9□□□□□ -0.97
PNKP-217ENST00000625216 MUC21A0A140T8X8 626 aa9□□□□□ -0.97
PNKP-217ENST00000625216 SNAI2O43623 268 aa9□□□□□ -0.97
PNKP-217ENST00000625216 RNASE3P12724 160 aaKnown RBP9□□□□□ -0.97
PNKP-217ENST00000625216 ASIPP42127 132 aa9□□□□□ -0.97
PNKP-217ENST00000625216 EMP1P54849 157 aa9□□□□□ -0.97
PNKP-217ENST00000625216 KCNS1Q96KK3 526 aa9□□□□□ -0.97
PNKP-217ENST00000625216 DKK2Q9UBU2 259 aa9□□□□□ -0.97
PNKP-217ENST00000625216 IGHV3-16A0A0C4DH30 117 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 PRM2P04554 102 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 MED14OSP0DP75 135 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 ATP5L2Q7Z4Y8 100 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 OR10AG1Q8NH19 301 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 LINC00467Q9BRT7 94 aa8.99□□□□□ -0.97
PNKP-217ENST00000625216 SSBP4Q9BWG4 385 aaPredicted RBP8.99□□□□□ -0.97
PNKP-217ENST00000625216 A0A1B0GUT8 65 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 RPS10P46783 165 aaKnown RBP8.98□□□□□ -0.97
PNKP-217ENST00000625216 HBBP68871 147 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 FAM222AQ5U5X8 452 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 TMEM136Q6ZRR5 245 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 TMEM256Q8N2U0 113 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 C9orf85Q96MD7 179 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 LINC01587Q99440 93 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 NDUFAF3Q9BU61 184 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 CNFNQ9BYD5 112 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 SCRT2Q9NQ03 307 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 MDFICQ9P1T7 246 aa8.98□□□□□ -0.97
PNKP-217ENST00000625216 TIMM8BQ9Y5J9 83 aaPredicted RBP8.98□□□□□ -0.97
PNKP-217ENST00000625216 TRGV11A0A075B6L2 103 aa8.97□□□□□ -0.97
PNKP-217ENST00000625216 CBY3A6NI87 242 aa8.97□□□□□ -0.97
PNKP-217ENST00000625216 S100A4P26447 101 aaKnown RBP8.97□□□□□ -0.97
PNKP-217ENST00000625216 RIGQ13278 110 aa8.97□□□□□ -0.97
PNKP-217ENST00000625216 DNAH6Q9C0G6 4158 aa8.97□□□□□ -0.97
PNKP-217ENST00000625216 LYRM9A8MSI8 78 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 SNURFLB1AK76 121 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 F2Z2F3 143 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 P0DMU3 169 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 FAM231AP0DMU4 169 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 FAM231CP0DMU5 169 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 CAMPP49913 170 aa8.96□□□□□ -0.98
PNKP-217ENST00000625216 SSTP61278 116 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms