RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 CEBPGP53567 150 aa6.74□□□□□ -1.33
LINC01560-202ENST00000624822 LGALS9BQ3B8N2 356 aa6.74□□□□□ -1.33
LINC01560-202ENST00000624822 CENPWQ5EE01 88 aa6.74□□□□□ -1.33
LINC01560-202ENST00000624822 TOR2AQ5JU69 321 aa6.74□□□□□ -1.33
LINC01560-202ENST00000624822 LINC00476Q8WZB0 136 aa6.74□□□□□ -1.33
LINC01560-202ENST00000624822 FAM210BQ96KR6 192 aa6.74□□□□□ -1.33
LINC01560-202ENST00000624822 NACAE9PAV3 2078 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 IGKV3D-20A0A0C4DH25 116 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 A0A0J9YY99 117 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 RAB19A4D1S5 217 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 GRIFINA4D1Z8 144 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 M0R2P5 195 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 NUDT3O95989 172 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 CRIP1P50238 77 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 ZNF674Q2M3X9 581 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 COX8CQ7Z4L0 72 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 C15orf53Q8NAA6 179 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 LYPD6BQ8NI32 183 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 MUC4Q99102 2169 aa6.73□□□□□ -1.33
LINC01560-202ENST00000624822 TRAV26-1A0A087WT03 109 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 TRGV4A0A0C4DH28 118 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 H3BVH4 76 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 SFTA3P0C7M3 94 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 HOXA5P20719 270 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 RAB14P61106 215 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 ZNF876PQ49A33 203 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 ZNF506Q5JVG8 444 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 UBE2DNLQ8IWF7 75 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 DAZAP1Q96EP5 407 aaKnown RBP6.72□□□□□ -1.33
LINC01560-202ENST00000624822 FAM210AQ96ND0 272 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 MLST8Q9BVC4 326 aa6.72□□□□□ -1.33
LINC01560-202ENST00000624822 PLECQ15149 4684 aaKnown RBP6.72□□□□□ -1.33
LINC01560-202ENST00000624822 PGPEP1LA6NFU8 196 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 KRBOX1C9JBD0 128 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 P0DMU3 169 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 FAM231AP0DMU4 169 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 FAM231CP0DMU5 169 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 RNASE3P12724 160 aaKnown RBP6.71□□□□□ -1.34
LINC01560-202ENST00000624822 RPL19P84098 196 aaKnown RBP6.71□□□□□ -1.34
LINC01560-202ENST00000624822 LGALS9CQ6DKI2 356 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 OR4C5Q8NGB2 326 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 RASL10AQ92737 203 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 C9orf85Q96MD7 179 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 C18orf15Q96N68 181 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 PARLQ9H300 379 aa6.71□□□□□ -1.34
LINC01560-202ENST00000624822 TRAV4A0A0B4J268 109 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 TMEM250H0YL14 139 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 ARMS2P0C7Q2 107 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 CLLU1Q5K131 121 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 SMIM12Q96EX1 92 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 ZNF479Q96JC4 524 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 LYSTQ99698 3801 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 BIN3Q9NQY0 253 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 IL36BQ9NZH7 164 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
LINC01560-202ENST00000624822 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
LINC01560-202ENST00000624822 TRBV20OR9-2A0A075B6H5 130 aa6.69□□□□□ -1.34
LINC01560-202ENST00000624822 M0R381 172 aa6.69□□□□□ -1.34
LINC01560-202ENST00000624822 IGLV2-8P01709 118 aa6.69□□□□□ -1.34
LINC01560-202ENST00000624822 S100A1P23297 94 aa6.69□□□□□ -1.34
LINC01560-202ENST00000624822 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
LINC01560-202ENST00000624822 KMT2CQ8NEZ4 4911 aaKnown RBP6.69□□□□□ -1.34
LINC01560-202ENST00000624822 IGHV3-73A0A0B4J1V6 119 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 LINC00862A6NCI5 91 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 P01737 135 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 SLAQ13239 276 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 FHL2Q14192 279 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 DNLZQ5SXM8 178 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 SMIM7Q9BQ49 75 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
LINC01560-202ENST00000624822 ALMS1Q8TCU4 4167 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 XKRY2A2RUG3 117 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 ZNF727A8MUV8 499 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 A8MWV9 139 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 RS1O15537 224 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 SRP19P09132 144 aaKnown RBP6.67□□□□□ -1.34
LINC01560-202ENST00000624822 CRYBA4P53673 196 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 CCL18P55774 89 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 SSTP61278 116 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 PEA15Q15121 130 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 FAM74A4Q5TZK3 123 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 CFAP126Q5VTH2 177 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 COMMD7Q86VX2 200 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 ZFP82Q8N141 532 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 POM121L12Q8N7R1 296 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 OR2D3Q8NGH3 330 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 OCC1Q8TAD7 63 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 VSIG2Q96IQ7 327 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 TPPP3Q9BW30 176 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 ICOSQ9Y6W8 199 aa6.67□□□□□ -1.34
LINC01560-202ENST00000624822 A0A096LPF7 62 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 C19orf71A6NCJ1 209 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 H3BNG1 76 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 K7EN84 100 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 CXCL1P09341 107 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 GZMBP10144 247 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 RPS20P60866 119 aaKnown RBP6.66□□□□□ -1.34
LINC01560-202ENST00000624822 SPANXN1Q5VSR9 72 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms