RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ANKHD1Q8IWZ3 2542 aaKnown RBP4.42□□□□□ -1.7
ERCC6-213ENST00000624341 GNLYP22749 145 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 SOCS3O14543 225 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 NXPH4O95158 308 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 CFC1BP0CG36 223 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 CFC1P0CG37 223 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 RNF138Q8WVD3 245 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 OVOL2Q9BRP0 275 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 C11orf1Q9H5F2 150 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE7O76087 117 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE12FP0CL80 117 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE12GP0CL81 117 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE12IP0CL82 117 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 MAPK1IP1LQ8NDC0 245 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 CITED1Q99966 193 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 SZT2Q5T011 3432 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 RHODO00212 210 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 KRTAP27-1Q3LI81 207 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 FOXI2Q6ZQN5 318 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 RPL39LQ96EH5 51 aaKnown RBP4.41□□□□□ -1.7
ERCC6-213ENST00000624341 MRPL36Q9P0J6 103 aaKnown RBP4.41□□□□□ -1.7
ERCC6-213ENST00000624341 SS18L2Q9UHA2 77 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 NDUFA4O00483 81 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 IGHV1-69DA0A0B4J2H0 117 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 IGHV1-69P01742 117 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 SS18Q15532 418 aa4.41□□□□□ -1.7
ERCC6-213ENST00000624341 E7EUB6 86 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 CRYBA4P53673 196 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 ODF3L1Q8IXM7 274 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 KAAG1Q9UBP8 84 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 CHD9Q3L8U1 2897 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 TINCRA0A1B0GVN0 87 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 K7EIM0 57 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 HAMPP81172 84 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 C4orf48Q5BLP8 95 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 TCTEX1D4Q5JR98 221 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 ZNF493Q6ZR52 646 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 CFAP54Q96N23 3096 aa4.4□□□□□ -1.7
ERCC6-213ENST00000624341 SPANXA1Q9NS26 97 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 ZNF106Q9H2Y7 1883 aaKnown RBP4.4□□□□□ -1.71
ERCC6-213ENST00000624341 TRAV12-1A0A0B4J245 112 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 I3L2K1 104 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 GAGE6Q13070 117 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 Q6ZPA2 131 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 MSMBP08118 114 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 ANKRD29Q8N6D5 301 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 TMEM126AQ9H061 195 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 TP73-AS1Q9UF72 201 aa4.4□□□□□ -1.71
ERCC6-213ENST00000624341 PLXNB3Q9ULL4 1909 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 SORL1Q92673 2214 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 C2orf70A6NJV1 201 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 TNRC6BQ9UPQ9 1833 aaKnown RBP4.39□□□□□ -1.71
ERCC6-213ENST00000624341 TRANK1O15050 2925 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 IGHV7-4-1A0A0J9YVY3 117 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 A4D1N5 150 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 PRAC2D3DTV9 90 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 UTF1Q5T230 341 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 IGFL3Q6UXB1 125 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 A0A0J9YXV3 536 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 PIP4P1Q86T03 277 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 COL6A3P12111 3177 aa4.39□□□□□ -1.71
ERCC6-213ENST00000624341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 IGKV2-29A2NJV5 120 aaPredicted RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 ZNF295-AS1Q8N0V1 137 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 ZNF503Q96F45 646 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 TMEM243Q9BU79 118 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 UBL5Q9BZL1 73 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 UNC80Q8N2C7 3258 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 CTSGP08311 255 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 LOXL1Q08397 574 aaPredicted RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 WT1P19544 449 aaPredicted RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 CR1LQ2VPA4 569 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 C8orf31Q8N9H6 132 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 Q9H8V8 135 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 RANBP2P49792 3224 aaKnown RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 RNF223E7ERA6 249 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 PROP1O75360 226 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 PCNX3Q9H6A9 2034 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 CUL9Q8IWT3 2517 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 BAALC-AS2P0C853 105 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 GRNP28799 593 aaKnown RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 LINC00322Q6ZN03 302 aaPredicted RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 TEN1Q86WV5 123 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 LINC01356Q8N9X3 169 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 PTH2Q96A98 100 aa4.38□□□□□ -1.71
ERCC6-213ENST00000624341 MRPL53Q96EL3 112 aaKnown RBP4.38□□□□□ -1.71
ERCC6-213ENST00000624341 TRACP01848 142 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 GDF5OSQ5U4N7 250 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 CITED2Q99967 270 aaPredicted RBP4.37□□□□□ -1.71
ERCC6-213ENST00000624341 DKK4Q9UBT3 224 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 MED12LQ86YW9 2145 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 REV3LO60673 3130 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 IGHV7-81A0A0B4J1V7 117 aa4.37□□□□□ -1.71
ERCC6-213ENST00000624341 RBAKDNA6NC62 111 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms