RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 SNHG12Q9BXW3 62 aa6.82□□□□□ -1.32
AP000542.3-201ENST00000623391 MPDZO75970 2070 aa6.82□□□□□ -1.32
AP000542.3-201ENST00000623391 IGHV4-31P0DP07 118 aa6.82□□□□□ -1.32
AP000542.3-201ENST00000623391 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 A0A0J9YX75 114 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 A0A1W2PPM0 123 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 C9JAW5 83 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 GTSF1Q8WW33 167 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 ZNF503Q96F45 646 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 SDK2Q58EX2 2172 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 CXCL5P42830 114 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 BRWD1-AS2P59051 145 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 Q6ZPA2 131 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 IGHV3-38A0A0C4DH36 116 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 CCDC140Q96MF4 163 aa6.81□□□□□ -1.32
AP000542.3-201ENST00000623391 TRAV4A0A0B4J268 109 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 TRBV10-1A0A0K0K1A3 114 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 ATP6V0E2Q8NHE4 81 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 DKK2Q9UBU2 259 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 ALPK3Q96L96 1907 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 E7EUB6 86 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 TMEM263Q8WUH6 116 aaKnown RBP6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 DNAJC9-AS1A6NH13 148 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 SPINK8P0C7L1 97 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 H7C423 109 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 ANGP03950 147 aaKnown RBP6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 CITED1Q99966 193 aa6.8□□□□□ -1.32
AP000542.3-201ENST00000623391 A0A1B0GXF2 115 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 SMIM9A6NGZ8 99 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 DEFB136Q30KP8 78 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 PRB1P04280 392 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 MRPL36Q9P0J6 103 aaKnown RBP6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 APRG1Q8IVJ8 170 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 Q8N1Y9 231 aa6.79□□□□□ -1.32
AP000542.3-201ENST00000623391 C12orf74Q32Q52 190 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 ZNF295-AS1Q8N0V1 137 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 Q8N6K4 173 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 ALPK2Q86TB3 2170 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 ZDBF2Q9HCK1 2354 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 PRAC2D3DTV9 90 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 WISP2O76076 250 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 FGF6P10767 208 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 HEATR1Q9H583 2144 aaKnown RBP6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 PROP1O75360 226 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 DEFB104AQ8WTQ1 72 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 CCL25O15444 150 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 CACNA1EQ15878 2313 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 MAP6D1Q9H9H5 199 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 YLPM1P49750 1951 aaKnown RBP6.78□□□□□ -1.32
AP000542.3-201ENST00000623391 CRYBA4P53673 196 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 SPATA12Q7Z6I5 190 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 C19orf84I3L1E1 186 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 RPL39LQ96EH5 51 aaKnown RBP6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 ACYP1P07311 99 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 CFC1BP0CG36 223 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 CFC1P0CG37 223 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 GAGE2AQ6NT46 116 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 IGKV2-29A2NJV5 120 aaPredicted RBP6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 H0YGX0 51 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 GYPEP15421 78 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 PFN2P35080 140 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 PIFOQ8TCI5 191 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 MDFICQ9P1T7 246 aa6.77□□□□□ -1.33
AP000542.3-201ENST00000623391 E9PLD3 99 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 DEFB125Q8N687 156 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 NAA38Q9BRA0 125 aaKnown RBP6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 IGLV2-8P01709 118 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 IL17DQ8TAD2 202 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 COX7B2Q8TF08 81 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 BAALCQ8WXS3 180 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 COX7A2LO14548 114 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 OCIAD2Q56VL3 154 aa6.76□□□□□ -1.33
AP000542.3-201ENST00000623391 PSMG3-AS1Q96PY0 264 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 K7EQG2 157 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 NPSP0C0P6 89 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 Q9H8V8 135 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 CCL18P55774 89 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 ZFAND3Q9H8U3 227 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 LYRM9A8MSI8 78 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 UNQ9165/PRO28630Q6UXU0 137 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 HHLA3Q9XRX5 114 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 SVILO95425 2214 aa6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 C1orf229Q6ZS94 237 aaPredicted RBP6.75□□□□□ -1.33
AP000542.3-201ENST00000623391 RBMY1FQ15415 496 aaKnown RBP6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 CITED2Q99967 270 aaPredicted RBP6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 DNAJC13O75165 2243 aa6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 ZNF843Q8N446 348 aa6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 ZNF625Q96I27 306 aaPredicted RBP6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 DSCR8Q96T75 97 aa6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 TM2D2Q9BX73 214 aa6.74□□□□□ -1.33
AP000542.3-201ENST00000623391 GATA1P15976 413 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms