RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 HLA-DRB4X5D2U9 266 aa6.88□□□□□ -1.31
HDAC9-229ENST00000622668 HCFC1P51610 2035 aa6.88□□□□□ -1.31
HDAC9-229ENST00000622668 TET2Q6N021 2002 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-229ENST00000622668 A0A0U1RRA0 63 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 K7EQG2 157 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 EYSQ5T1H1 3165 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 TSTD3H0UI37 97 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 IGHV3-30P01768 117 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 IGHV3-33P01772 117 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 TRGC2P03986 189 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 IGHV3-30-3P0DP02 117 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 IGHV3-30-5P0DP03 117 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 WI2-2373I1.2A0A1W2PRP0 233 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 INS-IGF2F8WCM5 200 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.87□□□□□ -1.31
HDAC9-229ENST00000622668 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 VCYO14598 125 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 SS18Q15532 418 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 TRAV1-1A0A0B4J248 108 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 SCGB1C2P0DMR2 95 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 NEGR1Q7Z3B1 354 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 RNF152Q8N8N0 203 aa6.87□□□□□ -1.31
HDAC9-229ENST00000622668 TRBV9A0A0B4J1U6 114 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 LINC00469Q8N7U9 141 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 CELSR3Q9NYQ7 3312 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-229ENST00000622668 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 TRPT1Q86TN4 253 aaKnown RBP6.86□□□□□ -1.31
HDAC9-229ENST00000622668 AMN1Q8IY45 258 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
HDAC9-229ENST00000622668 LINC01551Q86U37 167 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 HHLA3Q9XRX5 114 aa6.86□□□□□ -1.31
HDAC9-229ENST00000622668 C6orf226Q5I0X4 101 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 Q8N1Y9 231 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 RETNQ9HD89 108 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 LENEPQ9Y5L5 61 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 D6R8Y8 96 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 ORMDL2Q53FV1 153 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 OR10D4PQ8NGN7 298 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 ATP6V0E2Q8NHE4 81 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 LAMA1P25391 3075 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 LINC00862A6NCI5 91 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 A8MWP6 167 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 M0R2N4 97 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 PHOX2AO14813 284 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 RASL11AQ6T310 242 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 VAMP8Q9BV40 100 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 NXT2Q9NPJ8 142 aaKnown RBP6.85□□□□□ -1.31
HDAC9-229ENST00000622668 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
HDAC9-229ENST00000622668 TRAV26-1A0A087WT03 109 aa6.84□□□□□ -1.31
HDAC9-229ENST00000622668 APOMO95445 188 aa6.84□□□□□ -1.31
HDAC9-229ENST00000622668 PKIAP61925 76 aa6.84□□□□□ -1.31
HDAC9-229ENST00000622668 ZC2HC1AQ96GY0 325 aa6.84□□□□□ -1.31
HDAC9-229ENST00000622668 COL12A1Q99715 3063 aa6.84□□□□□ -1.31
HDAC9-229ENST00000622668 PLP1P60201 277 aa6.84□□□□□ -1.31
HDAC9-229ENST00000622668 BRI3O95415 125 aa6.84□□□□□ -1.32
HDAC9-229ENST00000622668 EGR2P11161 476 aaPredicted RBP6.84□□□□□ -1.32
HDAC9-229ENST00000622668 MIFP14174 115 aa6.84□□□□□ -1.32
HDAC9-229ENST00000622668 TMEM263Q8WUH6 116 aaKnown RBP6.84□□□□□ -1.32
HDAC9-229ENST00000622668 U3KQK5 164 aa6.84□□□□□ -1.32
HDAC9-229ENST00000622668 IGHV3-64A0A075B6Q5 118 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 GCSHP23434 173 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 TEX43Q6ZNM6 134 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 A0A0J9YWU9 116 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 SRSF3P84103 164 aaKnown RBP6.83□□□□□ -1.32
HDAC9-229ENST00000622668 PLA2G2EQ9NZK7 142 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 PRO0255Q9UI72 69 aa6.83□□□□□ -1.32
HDAC9-229ENST00000622668 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 PSMB2P49721 201 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 NUP35Q8NFH5 326 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 TRAV10A0A0B4J240 114 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 H7C2G1 150 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 SNRPEP62304 92 aaKnown RBP6.82□□□□□ -1.32
HDAC9-229ENST00000622668 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 IGHV4-28A0A0C4DH34 117 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 HOXA5P20719 270 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 TMEM170AQ8WVE7 144 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 ATMQ13315 3056 aa6.82□□□□□ -1.32
HDAC9-229ENST00000622668 IGKV1D-37A0A075B6S9 117 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 TRAV26-2A0A0B4J265 109 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 SMIM9A6NGZ8 99 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 IL15RAQ13261 267 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 Q6ZTI0 123 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 AMTNQ6UX39 209 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 SH2D6Q7Z4S9 175 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 NANOS2P60321 138 aaKnown RBP6.81□□□□□ -1.32
HDAC9-229ENST00000622668 EDN2P20800 178 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 C15orf53Q8NAA6 179 aa6.81□□□□□ -1.32
HDAC9-229ENST00000622668 KIR2DL5BA0A0G2JN68 375 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 KIR2DL5BA0A0G2JPC4 375 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 P0C879 139 aa6.8□□□□□ -1.32
HDAC9-229ENST00000622668 LINC00158P58513 81 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms