RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM236BA0A1B0GV22 79 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 UQCRQO14949 82 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 LYRM7Q5U5X0 104 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 LINC00477Q96M19 166 aa9.59□□□□□ -0.87
LITAF-221ENST00000622633 D6R8Y8 96 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 LYPD1Q8N2G4 141 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 FANCD2OSQ96PS1 177 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 ANKHD1Q8IWZ3 2542 aaKnown RBP9.58□□□□□ -0.88
LITAF-221ENST00000622633 TRBV7-7A0A0K0K1E9 115 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 OXTP01178 125 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 CRYGDP07320 174 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 NTN5Q8WTR8 489 aaPredicted RBP9.58□□□□□ -0.88
LITAF-221ENST00000622633 RELNP78509 3460 aa9.58□□□□□ -0.88
LITAF-221ENST00000622633 SPTA1P02549 2419 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 MUC6Q6W4X9 2439 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 K7ENP7 123 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 EFNA4P52798 201 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
LITAF-221ENST00000622633 CDSNQ15517 529 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
LITAF-221ENST00000622633 NPBQ8NG41 125 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 CSMD1Q96PZ7 3565 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 DPM2O94777 84 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 NDUFA3O95167 84 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 TIMD4Q96H15 378 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 U3KQK5 164 aa9.57□□□□□ -0.88
LITAF-221ENST00000622633 NCBP2LA6PVI3 153 aaKnown RBP9.56□□□□□ -0.88
LITAF-221ENST00000622633 NDPQ00604 133 aa9.56□□□□□ -0.88
LITAF-221ENST00000622633 AAMDCQ9H7C9 122 aa9.56□□□□□ -0.88
LITAF-221ENST00000622633 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
LITAF-221ENST00000622633 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
LITAF-221ENST00000622633 F8W735 103 aaPredicted RBP9.56□□□□□ -0.88
LITAF-221ENST00000622633 CCL21O00585 134 aa9.56□□□□□ -0.88
LITAF-221ENST00000622633 NBL1P41271 181 aa9.56□□□□□ -0.88
LITAF-221ENST00000622633 PTPRQQ9UMZ3 2332 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
LITAF-221ENST00000622633 TRAV40A0A0B4J280 105 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
LITAF-221ENST00000622633 PRSS1P07477 247 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 DYNAPQ8N1N2 210 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 TMEM160Q9NX00 188 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 NBASA2RRP1 2371 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 EBI3Q14213 229 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 LYZL1Q6UWQ5 148 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 FOXC2Q99958 501 aa9.55□□□□□ -0.88
LITAF-221ENST00000622633 TEX49A0A1B0GTD5 131 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 TINCRA0A1B0GVN0 87 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 ODF3BA8MYP8 253 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 SH2D1AO60880 128 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 TWIST1Q15672 202 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 IGFL4Q6B9Z1 124 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 DPH3Q96FX2 82 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
LITAF-221ENST00000622633 M0R1W7 72 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 RPL13AP40429 203 aaKnown RBP9.53□□□□□ -0.88
LITAF-221ENST00000622633 PDE6HQ13956 83 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 ZNF56Q15929 161 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 FBXL19-AS1Q494R0 122 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 TMEM190Q8WZ59 177 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 SPANXCQ9NY87 97 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 IGHV3-35A0A0C4DH35 117 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 LGALS9O00182 355 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 PMVKQ15126 192 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 ORMDL3Q8N138 153 aa9.53□□□□□ -0.88
LITAF-221ENST00000622633 MED13LQ71F56 2210 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 OVOL1O14753 267 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 VMO1Q7Z5L0 202 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 NDUFA11Q86Y39 141 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 Q8TAT8 98 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 MRPL35Q9NZE8 188 aaKnown RBP9.52□□□□□ -0.89
LITAF-221ENST00000622633 PRO0628Q9UI54 55 aa9.52□□□□□ -0.89
LITAF-221ENST00000622633 ATP5LO75964 103 aa9.51□□□□□ -0.89
LITAF-221ENST00000622633 LGALS1P09382 135 aaKnown RBP9.51□□□□□ -0.89
LITAF-221ENST00000622633 MALP21145 153 aa9.51□□□□□ -0.89
LITAF-221ENST00000622633 SMAD5-AS1Q9Y6J3 95 aa9.51□□□□□ -0.89
LITAF-221ENST00000622633 RS1O15537 224 aa9.51□□□□□ -0.89
LITAF-221ENST00000622633 CTSGP08311 255 aa9.51□□□□□ -0.89
LITAF-221ENST00000622633 EGR2P11161 476 aaPredicted RBP9.51□□□□□ -0.89
LITAF-221ENST00000622633 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
LITAF-221ENST00000622633 CRYGAP11844 174 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 ZNF80P51504 273 aaPredicted RBP9.5□□□□□ -0.89
LITAF-221ENST00000622633 ADORA2A-AS1P86434 159 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 DTX2Q86UW9 622 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 PRR25Q96S07 402 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 SMKR1H3BMG3 65 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 RPL35AP18077 110 aaKnown RBP9.5□□□□□ -0.89
LITAF-221ENST00000622633 ZFP36P26651 326 aaKnown RBP9.5□□□□□ -0.89
LITAF-221ENST00000622633 MRPL51Q4U2R6 128 aaKnown RBP9.5□□□□□ -0.89
LITAF-221ENST00000622633 Q8N6K4 173 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 JPT2Q9H910 190 aa9.5□□□□□ -0.89
LITAF-221ENST00000622633 LEPP41159 167 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 MYOZ3Q8TDC0 251 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
LITAF-221ENST00000622633 CYSTM1Q9H1C7 97 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms