RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 NRACQ8N912 160 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 OR2K2Q8NGT1 345 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 DKK2Q9UBU2 259 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 Q6ZQT7 251 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 Q6ZS46 218 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 ODF1Q14990 250 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 VAMP3Q15836 100 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 PSMG4Q5JS54 123 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 SMIM15Q7Z3B0 74 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 WFDC3Q8IUB2 231 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 USMG5Q96IX5 58 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 LINC00477Q96M19 166 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 ZNF702PQ9H963 129 aa13.18□□□□□ -0.3
FAM3A-222ENST00000621967 K7EP13 123 aa13.17□□□□□ -0.3
FAM3A-222ENST00000621967 SETD2Q9BYW2 2564 aaPredicted RBP13.17□□□□□ -0.3
FAM3A-222ENST00000621967 ZFAND2AQ8N6M9 145 aa13.17□□□□□ -0.3
FAM3A-222ENST00000621967 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
FAM3A-222ENST00000621967 OVOL1O14753 267 aa13.16□□□□□ -0.3
FAM3A-222ENST00000621967 TMEM95Q3KNT9 176 aa13.16□□□□□ -0.3
FAM3A-222ENST00000621967 Q6ZSV7 163 aa13.16□□□□□ -0.3
FAM3A-222ENST00000621967 HSD52Q0P140 79 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 SPANXN1Q5VSR9 72 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 ADAMTSL5Q6ZMM2 481 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 OR4C5Q8NGB2 326 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 CBY3A6NI87 242 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 H3BVH4 76 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 ERASQ7Z444 233 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 Q8N2B8 174 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 OR4X2Q8NGF9 303 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 FAM19A4Q96LR4 140 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 HHLA3Q9XRX5 114 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 UFC1Q9Y3C8 167 aa13.15□□□□□ -0.3
FAM3A-222ENST00000621967 C2CD3Q4AC94 2353 aa13.14□□□□□ -0.31
FAM3A-222ENST00000621967 ATP5LO75964 103 aa13.14□□□□□ -0.31
FAM3A-222ENST00000621967 PCP2Q8IVA1 136 aa13.14□□□□□ -0.31
FAM3A-222ENST00000621967 OR10J6PQ8NGY7 276 aa13.14□□□□□ -0.31
FAM3A-222ENST00000621967 MRAP2Q96G30 205 aa13.14□□□□□ -0.31
FAM3A-222ENST00000621967 SMPXQ9UHP9 88 aa13.14□□□□□ -0.31
FAM3A-222ENST00000621967 TRAV26-2A0A0B4J265 109 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 LAGE3Q14657 143 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 APRG1Q8IVJ8 170 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
FAM3A-222ENST00000621967 TRAV21A0A0B4J279 112 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 C7orf71A4D174 169 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 SMIM17P0DL12 118 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 KIR3DS1Q14943 382 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
FAM3A-222ENST00000621967 TRAV8-6A0A0B4J262 113 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 IGLV1-40P01703 118 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 IGKCP01834 107 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 PRSS1P07477 247 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 MED14OSP0DP75 135 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 NMUP48645 174 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 TCTAP57738 103 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 AMMECR1LQ6DCA0 310 aa13.12□□□□□ -0.31
FAM3A-222ENST00000621967 RNASE8Q8TDE3 154 aaKnown RBP13.12□□□□□ -0.31
FAM3A-222ENST00000621967 TRBV7-9A0A0J9YWB2 115 aa13.11□□□□□ -0.31
FAM3A-222ENST00000621967 NDUFA7O95182 113 aa13.11□□□□□ -0.31
FAM3A-222ENST00000621967 IGHV3-11P01762 117 aa13.11□□□□□ -0.31
FAM3A-222ENST00000621967 ZNF580Q9UK33 172 aa13.11□□□□□ -0.31
FAM3A-222ENST00000621967 A6NDN8 102 aa13.11□□□□□ -0.31
FAM3A-222ENST00000621967 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
FAM3A-222ENST00000621967 IGKV2D-26A0A0A0MRZ7 120 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 A0A0G2JLM5 398 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 H3BRM9 83 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 DPM2O94777 84 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 PF4V1P10720 104 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 CFHR3Q02985 330 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 CBY1Q9Y3M2 126 aa13.1□□□□□ -0.31
FAM3A-222ENST00000621967 HLA-DRB4P13762 266 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 PRIMA1Q86XR5 153 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.09□□□□□ -0.31
FAM3A-222ENST00000621967 LINC01006Q8NI28 216 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 SMIM2Q9BVW6 85 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 HIGD1BQ9P298 99 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 HLA-DRB4X5D2U9 266 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 MUC4Q99102 2169 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 DEFB1P60022 68 aa13.09□□□□□ -0.31
FAM3A-222ENST00000621967 J3KRW8 73 aa13.08□□□□□ -0.32
FAM3A-222ENST00000621967 ASIPP42127 132 aa13.08□□□□□ -0.32
FAM3A-222ENST00000621967 ANXA2RQ3ZCQ2 193 aa13.08□□□□□ -0.32
FAM3A-222ENST00000621967 MYOZ3Q8TDC0 251 aa13.08□□□□□ -0.32
FAM3A-222ENST00000621967 RHPN1-AS1Q9BWJ2 59 aa13.08□□□□□ -0.32
FAM3A-222ENST00000621967 DPH3P1Q9H4G8 78 aa13.08□□□□□ -0.32
FAM3A-222ENST00000621967 C9orf118A6NHY6 69 aa13.07□□□□□ -0.32
FAM3A-222ENST00000621967 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
FAM3A-222ENST00000621967 RBX1P62877 108 aa13.07□□□□□ -0.32
FAM3A-222ENST00000621967 RASL10AQ92737 203 aa13.07□□□□□ -0.32
FAM3A-222ENST00000621967 C20orf78Q9BR46 151 aa13.07□□□□□ -0.32
FAM3A-222ENST00000621967 ATRQ13535 2644 aa13.07□□□□□ -0.32
FAM3A-222ENST00000621967 A0A087WX48 190 aa13.06□□□□□ -0.32
FAM3A-222ENST00000621967 F6UB75 175 aa13.06□□□□□ -0.32
FAM3A-222ENST00000621967 M0R381 172 aa13.06□□□□□ -0.32
FAM3A-222ENST00000621967 TM4SF20Q53R12 229 aa13.06□□□□□ -0.32
FAM3A-222ENST00000621967 ZC2HC1BQ5TFG8 222 aa13.06□□□□□ -0.32
FAM3A-222ENST00000621967 LCNL1Q6ZST4 164 aa13.06□□□□□ -0.32
FAM3A-222ENST00000621967 MRPL35Q9NZE8 188 aaKnown RBP13.06□□□□□ -0.32
FAM3A-222ENST00000621967 K7EMI3 77 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms