RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.81
CBWD3-217ENST00000621474 ASIPP42127 132 aa10.02□□□□□ -0.81
CBWD3-217ENST00000621474 OR5I1Q13606 314 aa10.02□□□□□ -0.81
CBWD3-217ENST00000621474 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
CBWD3-217ENST00000621474 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
CBWD3-217ENST00000621474 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
CBWD3-217ENST00000621474 SCRT2Q9NQ03 307 aa10.02□□□□□ -0.81
CBWD3-217ENST00000621474 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
CBWD3-217ENST00000621474 ZNF876PQ49A33 203 aa10.01□□□□□ -0.81
CBWD3-217ENST00000621474 PTH2Q96A98 100 aa10.01□□□□□ -0.81
CBWD3-217ENST00000621474 ARMS2P0C7Q2 107 aa10□□□□□ -0.81
CBWD3-217ENST00000621474 S100A4P26447 101 aaKnown RBP10□□□□□ -0.81
CBWD3-217ENST00000621474 FHL2Q14192 279 aa10□□□□□ -0.81
CBWD3-217ENST00000621474 VSIG2Q96IQ7 327 aa10□□□□□ -0.81
CBWD3-217ENST00000621474 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
CBWD3-217ENST00000621474 CEBPGP53567 150 aa10□□□□□ -0.81
CBWD3-217ENST00000621474 TRAV4A0A0B4J268 109 aa9.99□□□□□ -0.81
CBWD3-217ENST00000621474 A0A0J9YY99 117 aa9.99□□□□□ -0.81
CBWD3-217ENST00000621474 CXCL1P09341 107 aa9.99□□□□□ -0.81
CBWD3-217ENST00000621474 DMRTA1Q5VZB9 504 aa9.99□□□□□ -0.81
CBWD3-217ENST00000621474 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
CBWD3-217ENST00000621474 CLLU1Q5K131 121 aa9.98□□□□□ -0.81
CBWD3-217ENST00000621474 CFAP126Q5VTH2 177 aa9.98□□□□□ -0.81
CBWD3-217ENST00000621474 SMIM7Q9BQ49 75 aa9.98□□□□□ -0.81
CBWD3-217ENST00000621474 SSBP4Q9BWG4 385 aaPredicted RBP9.98□□□□□ -0.81
CBWD3-217ENST00000621474 DNAH6Q9C0G6 4158 aa9.98□□□□□ -0.81
CBWD3-217ENST00000621474 RS1O15537 224 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 SNAI2O43623 268 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 PIK3CD-AS1Q5SR53 167 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 C15orf53Q8NAA6 179 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 NUDT10Q8NFP7 164 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 NUDT11Q96G61 164 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 RNASE7Q9H1E1 156 aaKnown RBP9.97□□□□□ -0.81
CBWD3-217ENST00000621474 JPT2Q9H910 190 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 LY96Q9Y6Y9 160 aa9.97□□□□□ -0.81
CBWD3-217ENST00000621474 H3BNG1 76 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 LY6G6CO95867 125 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 MED14OSP0DP75 135 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 GZMBP10144 247 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 CRYBA4P53673 196 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 UFSP1Q6NVU6 142 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 LINC01551Q86U37 167 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 OR4C5Q8NGB2 326 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 SMDT1Q9H4I9 107 aa9.96□□□□□ -0.81
CBWD3-217ENST00000621474 ZNF727A8MUV8 499 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 P01737 135 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 OR5AL1P0C617 328 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 IGLC6P0CF74 106 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 PEA15Q15121 130 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 OR2D3Q8NGH3 330 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 OR10AG1Q8NH19 301 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 DAZAP1Q96EP5 407 aaKnown RBP9.96□□□□□ -0.82
CBWD3-217ENST00000621474 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 PRO0255Q9UI72 69 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 PHLDA3Q9Y5J5 127 aa9.96□□□□□ -0.82
CBWD3-217ENST00000621474 NXPH4O95158 308 aa9.95□□□□□ -0.82
CBWD3-217ENST00000621474 NUDT3O95989 172 aa9.95□□□□□ -0.82
CBWD3-217ENST00000621474 RAB14P61106 215 aa9.95□□□□□ -0.82
CBWD3-217ENST00000621474 SAMD10Q9BYL1 202 aa9.95□□□□□ -0.82
CBWD3-217ENST00000621474 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
CBWD3-217ENST00000621474 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
CBWD3-217ENST00000621474 M0R381 172 aa9.94□□□□□ -0.82
CBWD3-217ENST00000621474 A0A096LPF7 62 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 IGHV3-73A0A0B4J1V6 119 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 MUC21A0A0G2JKD1 596 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 MUC21A0A140T8X8 626 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 PAX4O43316 350 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 GATA1P15976 413 aaPredicted RBP9.93□□□□□ -0.82
CBWD3-217ENST00000621474 FAM231DQ6ZW35 169 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 A8MWV9 139 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 CRYGDP07320 174 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 FAM74A3Q4VXF1 159 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 Q6ZSN1 163 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 ZFP82Q8N141 532 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 SFRP2Q96HF1 295 aa9.93□□□□□ -0.82
CBWD3-217ENST00000621474 RPP21Q9H633 154 aaKnown RBP9.93□□□□□ -0.82
CBWD3-217ENST00000621474 P0DMU3 169 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 FAM231AP0DMU4 169 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 FAM231CP0DMU5 169 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 RPS20P60866 119 aaKnown RBP9.92□□□□□ -0.82
CBWD3-217ENST00000621474 RPL23P62829 140 aaKnown RBP9.92□□□□□ -0.82
CBWD3-217ENST00000621474 SLAQ13239 276 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 SLC25A29Q8N8R3 303 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 FER1L6-AS1Q8NA97 138 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 SYT8Q8NBV8 401 aa9.92□□□□□ -0.82
CBWD3-217ENST00000621474 LOC100131303A0A0U1RQF7 123 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 K7EQD1 137 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 CIDEAO60543 219 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 TMEM241Q24JQ0 296 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 ZFP2Q6ZN57 461 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 GTSF1Q8WW33 167 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 ISOC2Q96AB3 205 aa9.91□□□□□ -0.82
CBWD3-217ENST00000621474 A0A087WWL8 130 aa9.9□□□□□ -0.82
CBWD3-217ENST00000621474 MSRB1Q9NZV6 116 aa9.9□□□□□ -0.82
CBWD3-217ENST00000621474 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
CBWD3-217ENST00000621474 LINC00588Q9Y4M8 146 aa9.9□□□□□ -0.82
CBWD3-217ENST00000621474 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 TRBV6-4A0A1B0GX49 114 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 XKRY2A2RUG3 117 aa9.89□□□□□ -0.83
CBWD3-217ENST00000621474 CTRLP40313 264 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms