RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SPRNQ5BIV9 151 aa7.65□□□□□ -1.18
CLTCL1-211ENST00000621271 PLXNA2O75051 1894 aa7.65□□□□□ -1.18
CLTCL1-211ENST00000621271 TMEM89A2RUT3 159 aa7.65□□□□□ -1.18
CLTCL1-211ENST00000621271 CAMK2N2Q96S95 79 aa7.65□□□□□ -1.18
CLTCL1-211ENST00000621271 SEM1Q6ZVN7 128 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 RNF183Q96D59 192 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 LENEPQ9Y5L5 61 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 C2orf70A6NJV1 201 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 MAJINQ3KP22 176 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 C15orf53Q8NAA6 179 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 PLA2G2EQ9NZK7 142 aa7.65□□□□□ -1.19
CLTCL1-211ENST00000621271 COX8AP10176 69 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 PRSS57Q6UWY2 283 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 SIGLEC8Q9NYZ4 499 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 PLXND1Q9Y4D7 1925 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 K7EP13 123 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 NDUFA11Q86Y39 141 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 Q8N9W7 124 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 AGPAT4-IT1Q9H0P7 198 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
CLTCL1-211ENST00000621271 GNRH2O43555 120 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 SHANK1Q9Y566 2161 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 C4orf48Q5BLP8 95 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 ANKHD1Q8IWZ3 2542 aaKnown RBP7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 SRCAPQ6ZRS2 3230 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 C19orf84I3L1E1 186 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 K7EP34 96 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 SPINK8P0C7L1 97 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 DYNAPQ8N1N2 210 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 DEFB4AO15263 64 aa7.63□□□□□ -1.19
CLTCL1-211ENST00000621271 HLA-DMBP28068 263 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 MRPL51Q4U2R6 128 aaKnown RBP7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 LYPD6Q86Y78 171 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 ETDCA0A1B0GVM5 59 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 BVES-AS1Q5T3Y7 98 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 RBAKDNA6NC62 111 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 IGHG2P01859 326 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 C11orf45Q8TAV5 145 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 K7EQD1 137 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 ZC2HC1AQ96GY0 325 aa7.62□□□□□ -1.19
CLTCL1-211ENST00000621271 IGLV10-54A0A075B6I4 117 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 FXYD5Q96DB9 178 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 FANCD2OSQ96PS1 177 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 C20orf78Q9BR46 151 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 NOTCH4Q99466 2003 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 IGLV11-55A0A075B6I3 123 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 RNASE13Q5GAN3 156 aaKnown RBP7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 GAGE2AQ6NT46 116 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 MED13Q9UHV7 2174 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 K7EMT4 169 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 K7EN84 100 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 TNFRSF13BO14836 293 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 LGALS9BQ3B8N2 356 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 LGALS9CQ6DKI2 356 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 AMTNQ6UX39 209 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 GPHB5Q86YW7 130 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 SOCS3O14543 225 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 IGHV4-31P0DP07 118 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 SIRPDQ9H106 197 aa7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 COL4A4P53420 1690 aaPredicted RBP7.61□□□□□ -1.19
CLTCL1-211ENST00000621271 HIST2H2BCQ6DN03 193 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 HHLA3Q9XRX5 114 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 SPRY2O43597 315 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 C17orf77Q96MU5 243 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 HELZP42694 1942 aaKnown RBP7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 TNCP24821 2201 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 IGKV2-29A2NJV5 120 aaPredicted RBP7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 F8W1H4 67 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 C5orf38Q86SI9 138 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 Q8N7P7 452 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 RNF138Q8WVD3 245 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 WNK1Q9H4A3 2382 aa7.6□□□□□ -1.19
CLTCL1-211ENST00000621271 CTSGP08311 255 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 C16orf54Q6UWD8 224 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 COX7A2LO14548 114 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 HILS1P60008 231 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 CFHR4Q92496 578 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 CCDC168Q8NDH2 2452 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 NUP210Q8TEM1 1887 aaPredicted RBP7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 TRAV13-2A0A0B4J235 113 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 A0A1W2PPM0 123 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 A6NDX4 124 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 PRR20EP86478 221 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 PRR20CP86479 221 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 PRR20DP86480 221 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 PRR20BP86481 221 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 PRR20AP86496 221 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 DAZ2Q13117 558 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 DAZ4Q86SG3 579 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 DAZ3Q9NR90 486 aaKnown RBP7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 UBE2AP49459 152 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 BOD1L2Q8IYS8 172 aa7.59□□□□□ -1.19
CLTCL1-211ENST00000621271 NAV2Q8IVL1 2488 aa7.59□□□□□ -1.2
CLTCL1-211ENST00000621271 K7EIM0 57 aa7.59□□□□□ -1.2
CLTCL1-211ENST00000621271 CCL25O15444 150 aa7.59□□□□□ -1.2
CLTCL1-211ENST00000621271 INAFM2P0DMQ5 153 aa7.59□□□□□ -1.2
CLTCL1-211ENST00000621271 TIMM17AQ99595 171 aa7.59□□□□□ -1.2
CLTCL1-211ENST00000621271 SPATA25Q9BR10 227 aa7.59□□□□□ -1.2
CLTCL1-211ENST00000621271 LY6G6DO95868 133 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms