RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 LINC00311Q8N616 119 aa5.7□□□□□ -1.5
COLCA1-205ENST00000620864 NYNRINQ9P2P1 1898 aaKnown RBP5.69□□□□□ -1.5
COLCA1-205ENST00000620864 ZNRF2Q8NHG8 242 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 IGKV1-27A0A075B6S5 117 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 DKK1O94907 266 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 OTOGLQ3ZCN5 2332 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 C10orf55Q5SWW7 151 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 FOXL2NBQ6ZUU3 175 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 Q8N1Y9 231 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 GAFA1Q96PS6 74 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 PINLYPA6NC86 204 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 CD177Q8N6Q3 437 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 DEFB104AQ8WTQ1 72 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 NXPH4O95158 308 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 ZNF833PQ6ZTB9 187 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 LRRC75A-AS1Q8N1F1 130 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 TICRRQ7Z2Z1 1910 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 NDPQ00604 133 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 LYPD6Q86Y78 171 aa5.69□□□□□ -1.5
COLCA1-205ENST00000620864 LINC01619G3V211 115 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 COX7B2Q8TF08 81 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 TMEM61Q8N0U2 210 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 FGFBP3Q8TAT2 258 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 ZNF106Q9H2Y7 1883 aaKnown RBP5.68□□□□□ -1.5
COLCA1-205ENST00000620864 PIP4P1Q86T03 277 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 LINC00479Q96M42 142 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 ETV2O00321 342 aaPredicted RBP5.68□□□□□ -1.5
COLCA1-205ENST00000620864 ZNF837Q96EG3 531 aaPredicted RBP5.68□□□□□ -1.5
COLCA1-205ENST00000620864 CYYR1Q96J86 154 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 TRAV4A0A0B4J268 109 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 E9PLD3 99 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 MSMBP08118 114 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 Q6ZS92 163 aa5.68□□□□□ -1.5
COLCA1-205ENST00000620864 HELZP42694 1942 aaKnown RBP5.68□□□□□ -1.5
COLCA1-205ENST00000620864 DEFB131AP59861 70 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 FXYD5Q96DB9 178 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 MED14OSP0DP75 135 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 CRIPAKQ8N1N5 446 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 TIMM17AQ99595 171 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 UPK3BQ9BT76 320 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 UBE2E1P51965 193 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 ANGP03950 147 aaKnown RBP5.67□□□□□ -1.5
COLCA1-205ENST00000620864 IGHV1-58A0A0C4DH39 117 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 LY6HO94772 140 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 HRCT1Q6UXD1 115 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 PCP2Q8IVA1 136 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 Q8TCH9 128 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.67□□□□□ -1.5
COLCA1-205ENST00000620864 MDS2Q8NDY4 140 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 XCL2Q9UBD3 114 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
COLCA1-205ENST00000620864 CACNA1HO95180 2353 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 WFDC2Q14508 124 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 NDUFA7O95182 113 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 Q6ZRM9 215 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 Q9HAA7 133 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 USP17L23D6RBM5 183 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 TGFBR3LH3BV60 316 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 OVOL3O00110 214 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 DIRC1Q969H9 104 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 ZNF503Q96F45 646 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 TNCP24821 2201 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 LCTP09848 1927 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 ZNF726P1Q15940 193 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 SPINK13Q1W4C9 94 aa5.66□□□□□ -1.5
COLCA1-205ENST00000620864 COX7A2LO14548 114 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 LY6G6DO95868 133 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 EML6Q6ZMW3 1958 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 IGKV2D-24A0A075B6R9 120 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 A0A0G2JRQ6 117 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 FOXE3Q13461 319 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 RUSC1-AS1Q66K80 236 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 PCNX2A6NKB5 2137 aa5.65□□□□□ -1.5
COLCA1-205ENST00000620864 TRAV26-2A0A0B4J265 109 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 GGNQ86UU5 652 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 TOMM6Q96B49 74 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 GREB1LQ9C091 1923 aaPredicted RBP5.65□□□□□ -1.51
COLCA1-205ENST00000620864 DENND4AQ7Z401 1863 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 FAM229AH3BQW9 127 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 CASC2Q6XLA1 102 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV1D-17A0A075B6S4 117 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 J3QLI3 93 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 BPY2O14599 106 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 SPATA12Q7Z6I5 190 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 WNK1Q9H4A3 2382 aa5.65□□□□□ -1.51
COLCA1-205ENST00000620864 IGKV1OR2-108A0A075B7D4 117 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 A0A096LPF7 62 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 IGHV7-4-1A0A0J9YVY3 117 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 LRCOL1A6NCL2 159 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 LINC00694P0DN24 101 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 SERP2Q8N6R1 65 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 KIR2DL5BQ8NHK3 375 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 TRBV6-1A0A0K0K1D8 114 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 SAA4P35542 130 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 TIRAPP58753 221 aa5.64□□□□□ -1.51
COLCA1-205ENST00000620864 C9orf47Q6ZRZ4 202 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms