RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 PRR25Q96S07 402 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 PGPEP1Q9NXJ5 209 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 WI2-2373I1.2A0A1W2PRP0 233 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 A8MWV9 139 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 CD28P10747 220 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 PRAC2D3DTV9 90 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 M0R1W7 72 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 NDUFS8O00217 210 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 SLC25A16P16260 332 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 ODF1Q14990 250 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 C10orf126Q8N4M7 172 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 HHLA3Q9XRX5 114 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 MOB4Q9Y3A3 225 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 LRRK2Q5S007 2527 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 ZNF292O60281 2723 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 H3BRN7 92 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 H3BUX3 64 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 YAE1D1Q9NRH1 226 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 TMEM14CQ9P0S9 112 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 BSNQ9UPA5 3926 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 TRGV2A0A075B6R0 118 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 TRBV7-9A0A0J9YWB2 115 aa5.4□□□□□ -1.54
NEDD9-216ENST00000620854 CKS1BP61024 79 aa5.4□□□□□ -1.55
NEDD9-216ENST00000620854 DTX2Q86UW9 622 aa5.4□□□□□ -1.55
NEDD9-216ENST00000620854 SPAG8Q99932 426 aaPredicted RBP5.4□□□□□ -1.55
NEDD9-216ENST00000620854 MINOS1Q5TGZ0 78 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 ZNF493Q6ZR52 646 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 ERG28Q9UKR5 140 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 MINOS1-NBL1R4GNA1 71 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 FASNP49327 2511 aaKnown RBP5.39□□□□□ -1.55
NEDD9-216ENST00000620854 OOSP1A8MZH6 123 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 IGLL5B9A064 214 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 PLNP26678 52 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 SAA4P35542 130 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 IL17RELQ6ZVW7 336 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 CEND1Q8N111 149 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 JMJD1CQ15652 2540 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 PKD1L2Q7Z442 2459 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 KNCNA6PVL3 124 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 C16orf54Q6UWD8 224 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 DYNAPQ8N1N2 210 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 ZNF625Q96I27 306 aaPredicted RBP5.39□□□□□ -1.55
NEDD9-216ENST00000620854 LINC00477Q96M19 166 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 C20orf78Q9BR46 151 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 SMPXQ9UHP9 88 aa5.39□□□□□ -1.55
NEDD9-216ENST00000620854 HTN3P15516 51 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 C12orf74Q32Q52 190 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 LYPD1Q8N2G4 141 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 LINC00311Q8N616 119 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 PTH2Q96A98 100 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 RNF185Q96GF1 192 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 DPH3P1Q9H4G8 78 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 SIVA1O15304 175 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 ATP6V0E1O15342 81 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 IGLV1-47P01700 117 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 HOXB4P17483 251 aaPredicted RBP5.38□□□□□ -1.55
NEDD9-216ENST00000620854 FOXI2Q6ZQN5 318 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 KAAG1Q9UBP8 84 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 OVOL1O14753 267 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 IGHV3-53P01767 116 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 CRYGBP07316 175 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 CFHR4Q92496 578 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 SPXQ9BT56 116 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 RHPN1-AS1Q9BWJ2 59 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 RNF223E7ERA6 249 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 MSMBP08118 114 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 DEFB1P60022 68 aa5.38□□□□□ -1.55
NEDD9-216ENST00000620854 PHLDA1Q8WV24 401 aaPredicted RBP5.38□□□□□ -1.55
NEDD9-216ENST00000620854 C9orf139Q6ZV77 190 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 RNF5Q99942 180 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 SPANXB1Q9NS25 103 aaPredicted RBP5.37□□□□□ -1.55
NEDD9-216ENST00000620854 U3KQK5 164 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 C9JAW5 83 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 MRPS12O15235 138 aaKnown RBP5.37□□□□□ -1.55
NEDD9-216ENST00000620854 GAGE2BQ13066 116 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 GAGE2EQ4V326 116 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 C2orf66Q6UXQ4 117 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 LINC01356Q8N9X3 169 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 DLX4Q92988 240 aaPredicted RBP5.37□□□□□ -1.55
NEDD9-216ENST00000620854 TMEM101Q96IK0 257 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 GAGE2DQ9UEU5 116 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 LINC01549A6NIU2 74 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 PDE6HQ13956 83 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 KLHL30-AS1Q8NEE0 82 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 FANCD2OSQ96PS1 177 aa5.37□□□□□ -1.55
NEDD9-216ENST00000620854 C11orf68Q9H3H3 251 aaKnown RBP5.37□□□□□ -1.55
NEDD9-216ENST00000620854 CENPEQ02224 2701 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 ZNF462Q96JM2 2506 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 MAPK1IP1LQ8NDC0 245 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 C11orf21Q9P2W6 132 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 SMAD5-AS1Q9Y6J3 95 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 HLA-DRB4P13762 266 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 HLA-DRB4X5D2U9 266 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 COL27A1Q8IZC6 1860 aaPredicted RBP5.36□□□□□ -1.55
NEDD9-216ENST00000620854 TRAV26-1A0A087WT03 109 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 M0R2P5 195 aa5.36□□□□□ -1.55
NEDD9-216ENST00000620854 VCYO14598 125 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms