RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 DNLZQ5SXM8 178 aa9.64□□□□□ -0.87
NEK3-210ENST00000620675 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
NEK3-210ENST00000620675 RPP21Q9H633 154 aaKnown RBP9.64□□□□□ -0.87
NEK3-210ENST00000620675 JPT2Q9H910 190 aa9.64□□□□□ -0.87
NEK3-210ENST00000620675 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
NEK3-210ENST00000620675 IL36BQ9NZH7 164 aa9.64□□□□□ -0.87
NEK3-210ENST00000620675 M0R2P5 195 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 IGHV3-53P01767 116 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 FAM231DQ6ZW35 169 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 SPXQ9BT56 116 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 BIN3Q9NQY0 253 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 F8W036 122 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 GATCO43716 136 aaKnown RBP9.63□□□□□ -0.87
NEK3-210ENST00000620675 ZNF876PQ49A33 203 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 PHLDA1Q8WV24 401 aaPredicted RBP9.63□□□□□ -0.87
NEK3-210ENST00000620675 RASL10AQ92737 203 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 TPPP3Q9BW30 176 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 V9GYV3 84 aa9.63□□□□□ -0.87
NEK3-210ENST00000620675 IGLC6P0CF74 106 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 HOXA5P20719 270 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 TRGV2A0A075B6R0 118 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 M0R381 172 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 LGALS9BQ3B8N2 356 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 ZNF479Q96JC4 524 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 SSBP4Q9BWG4 385 aaPredicted RBP9.62□□□□□ -0.87
NEK3-210ENST00000620675 OSTCQ9NRP0 149 aa9.62□□□□□ -0.87
NEK3-210ENST00000620675 CXCL1P09341 107 aa9.61□□□□□ -0.87
NEK3-210ENST00000620675 MSRB1Q9NZV6 116 aa9.61□□□□□ -0.87
NEK3-210ENST00000620675 PHLDA3Q9Y5J5 127 aa9.61□□□□□ -0.87
NEK3-210ENST00000620675 DEFB131BA0A096LNP1 70 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 SNAI2O43623 268 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 LYZL1Q6UWQ5 148 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 OR10G8Q8NGN5 311 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 SAMD10Q9BYL1 202 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 TEX48A0A1B0GUV7 120 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 OR5AL1P0C617 328 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 SEC11CQ9BY50 192 aa9.6□□□□□ -0.87
NEK3-210ENST00000620675 IGHV3-73A0A0B4J1V6 119 aa9.59□□□□□ -0.87
NEK3-210ENST00000620675 C10orf91Q5T1B1 145 aa9.59□□□□□ -0.87
NEK3-210ENST00000620675 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
NEK3-210ENST00000620675 F5H768 121 aa9.59□□□□□ -0.87
NEK3-210ENST00000620675 ATP5G1P05496 136 aa9.59□□□□□ -0.87
NEK3-210ENST00000620675 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
NEK3-210ENST00000620675 RNF212Q495C1 297 aa9.59□□□□□ -0.87
NEK3-210ENST00000620675 TRAV10A0A0B4J240 114 aa9.58□□□□□ -0.88
NEK3-210ENST00000620675 MED14OSP0DP75 135 aa9.58□□□□□ -0.88
NEK3-210ENST00000620675 CASC10Q5T4H9 136 aa9.58□□□□□ -0.88
NEK3-210ENST00000620675 C15orf54Q8N8G6 183 aa9.58□□□□□ -0.88
NEK3-210ENST00000620675 PGLYRP4Q96LB8 373 aa9.58□□□□□ -0.88
NEK3-210ENST00000620675 VPS13DQ5THJ4 4388 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 A0A087WWL8 130 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 A8MWL6 223 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 NXPH4O95158 308 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 CEMP1Q6PRD7 247 aaPredicted RBP9.57□□□□□ -0.88
NEK3-210ENST00000620675 TSKUQ8WUA8 353 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 C18orf15Q96N68 181 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 KMT2CQ8NEZ4 4911 aaKnown RBP9.57□□□□□ -0.88
NEK3-210ENST00000620675 XKRY2A2RUG3 117 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 HIGD1CA8MV81 97 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 RS1O15537 224 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 CTRLP40313 264 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 FHL2Q14192 279 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 CT83Q5H943 113 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 OR4C5Q8NGB2 326 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 PTH2Q96A98 100 aa9.57□□□□□ -0.88
NEK3-210ENST00000620675 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 TRAV4A0A0B4J268 109 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 A0A0J9YY99 117 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 IGLL5B9A064 214 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
NEK3-210ENST00000620675 SPANXN1Q5VSR9 72 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 TMEM88Q6PEY1 159 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 Q6ZSN1 163 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 ZFP82Q8N141 532 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 CARHSP1Q9Y2V2 147 aaKnown RBP9.56□□□□□ -0.88
NEK3-210ENST00000620675 KMT2AQ03164 3969 aa9.56□□□□□ -0.88
NEK3-210ENST00000620675 NTF3P20783 257 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 Q9UF83 564 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 SACSQ9NZJ4 4579 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 A0A1W2PPQ1 181 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 CRYGDP07320 174 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 FOXA3P55318 350 aaPredicted RBP9.55□□□□□ -0.88
NEK3-210ENST00000620675 FAM74A4Q5TZK3 123 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 NUP35Q8NFH5 326 aa9.55□□□□□ -0.88
NEK3-210ENST00000620675 APOC3P02656 99 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 C14orf178Q8N769 122 aaPredicted RBP9.54□□□□□ -0.88
NEK3-210ENST00000620675 SYT8Q8NBV8 401 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 VSIG2Q96IQ7 327 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 CNFNQ9BYD5 112 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 IGHV4-4A0A075B6R2 117 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 SMIM27A0A1W2PRY6 76 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
NEK3-210ENST00000620675 TRGV4A0A0C4DH28 118 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms