RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 TRAV12-3A0A0B4J271 114 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 CEACAM4O75871 244 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 CFC1BP0CG36 223 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 CFC1P0CG37 223 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 FAM74A4Q5TZK3 123 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 DUX3Q96PT4 197 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 PDE6HQ13956 83 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 FCN3O75636 299 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 TEX36Q5VZQ5 186 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 BAALCQ8WXS3 180 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 RAB1BQ9H0U4 201 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 VSTM5A8MXK1 200 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 LOXP28300 417 aaPredicted RBP7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 FAM57AQ8TBR7 257 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 YAE1D1Q9NRH1 226 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 TRBV6-1A0A0K0K1D8 114 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 NDPQ00604 133 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 Q6ZS92 163 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 RASL10AQ92737 203 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 AGPAT4-IT1Q9H0P7 198 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
TNFAIP3-210ENST00000620204 GATA4P43694 442 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 UBTD1Q9HAC8 227 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 TP53TG1Q9Y2A0 90 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 COL27A1Q8IZC6 1860 aaPredicted RBP7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 RPL13AP40429 203 aaKnown RBP7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 DEFB1P60022 68 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 RPL39P62891 51 aaKnown RBP7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 C16orf92Q96LL3 132 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 FAM110AQ9BQ89 295 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 MYO18BQ8IUG5 2567 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 MSRB2Q9Y3D2 182 aa7.52□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGLV3-9A0A075B6K5 115 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 H3BMM0 161 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 TMEM178BH3BS89 294 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 BUB1B-PAK6H3BSN5 160 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGHG3P01860 377 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 UBE2D1P51668 147 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 UBE2WQ96B02 151 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 SMG1Q96Q15 3661 aaKnown RBP7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 A0A0J9YY99 117 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 M0QXV9 152 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 UBE2D3P61077 147 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 UBE2D2P62837 147 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 MRGPRG-AS1Q2M3A8 158 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 NRACQ8N912 160 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 TRAV8-3A0A0A6YYJ7 113 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 ASIPP42127 132 aa7.51□□□□□ -1.21
TNFAIP3-210ENST00000620204 CD7P09564 240 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 ATXN8Q156A1 80 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 LINC01620Q4KN68 170 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 CSMD1Q96PZ7 3565 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 K7ENP7 123 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 NBR2O15453 112 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 A0A087WWL8 130 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 J3QQQ9 107 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 RS1O15537 224 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 CLEC19AQ6UXS0 136 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 MUSTN1Q8IVN3 82 aa7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
TNFAIP3-210ENST00000620204 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGF1P05019 195 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 COX6CP09669 75 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 RNASE4P34096 147 aaKnown RBP7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 BSPH1Q075Z2 132 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 LINC00574Q9H8X3 128 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 FAM215AQ9Y5M1 114 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 RAI1Q7Z5J4 1906 aaPredicted RBP7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 HIVEP3Q5T1R4 2406 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 FAM236AA0A1B0GUQ0 79 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 FAM236BA0A1B0GV22 79 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 SRD5A1P18405 259 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 PMVKQ15126 192 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGFL2Q6UWQ7 119 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 DKK4Q9UBT3 224 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 CCL21O00585 134 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 ATP5J2P56134 94 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 COL12A1Q99715 3063 aa7.49□□□□□ -1.21
TNFAIP3-210ENST00000620204 RELNP78509 3460 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 TRAV12-1A0A0B4J245 112 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 CSPG4Q6UVK1 2322 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 LY6HO94772 140 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 LINC00311Q8N616 119 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 SLC50A1Q9BRV3 221 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 SPXQ9BT56 116 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 SMAD5-AS1Q9Y6J3 95 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 IGF2-ASQ6U949 168 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 SEM1Q6ZVN7 128 aa7.48□□□□□ -1.21
TNFAIP3-210ENST00000620204 TOMM6Q96B49 74 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 1081.7 ms