RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 A0A096LNJ9 63 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 CRYGBP07316 175 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 HERVK_113P61574 105 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 SLC50A1Q9BRV3 221 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 UBR5O95071 2799 aaPredicted RBP5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3OR16-13A0A075B7E8 117 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3-74A0A0B4J1X5 117 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 WI2-2373I1.2A0A1W2PRP0 233 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 B4DSR2 109 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 H3BMG7 143 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 MSMBP08118 114 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 MGPP08493 103 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 SCGB1C2P0DMR2 95 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 SLC25A16P16260 332 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 GATA3P23771 443 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 SAA4P35542 130 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 UBE2E1P51965 193 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 ERCC8Q13216 396 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 TAL2Q16559 108 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 BRD3OSQ6XYD6 125 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 ZNF502Q8TBZ5 544 aa5.4□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3-66A0A0C4DH42 116 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 APOMO95445 188 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 SCGB1A1P11684 91 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 MINOS1Q5TGZ0 78 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 MINOS1-NBL1R4GNA1 71 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 HOXA3O43365 443 aaPredicted RBP5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 HERV-K104P63124 156 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 FOXE3Q13461 319 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 METTL26Q96S19 204 aa5.4□□□□□ -1.55
SRGAP3-213ENST00000618999 PRRC2AP48634 2157 aaKnown RBP5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 IGLL5B9A064 214 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 LY6LH3BQJ8 138 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 H7C1H1 209 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 NPFFO15130 113 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 CKS1BP61024 79 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 DEFB113Q30KQ7 82 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 C12orf74Q32Q52 190 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 ORMDL2Q53FV1 153 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 FOXI2Q6ZQN5 318 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 ODF3BA8MYP8 253 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 SPRY2O43597 315 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 GATA1P15976 413 aaPredicted RBP5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 HLA-DMBP28068 263 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 AMTNQ6UX39 209 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 DYNAPQ8N1N2 210 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 CYSLTR1Q9Y271 337 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 CELSR2Q9HCU4 2923 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 CENPVL3A0A0U1RRI6 287 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 M0R381 172 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 WFDC2Q14508 124 aa5.39□□□□□ -1.55
SRGAP3-213ENST00000618999 TLN2Q9Y4G6 2542 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 IGHV3-49A0A0A0MS15 119 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 OOSP1A8MZH6 123 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 H3BVH4 76 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 IGLC6P0CF74 106 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 PAX8Q06710 450 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 MRGPRG-AS1Q2M3A8 158 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 IL17RELQ6ZVW7 336 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 PHLDA3Q9Y5J5 127 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 TRAV26-1A0A087WT03 109 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 A0A087WX48 190 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 ZNF815PA8K554 130 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 K7EMI3 77 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 PSMB2P49721 201 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 ZNF80P51504 273 aaPredicted RBP5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 SH2D6Q7Z4S9 175 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 ZNF418Q8TF45 676 aaPredicted RBP5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 Q96MF0 132 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 IGLV11-55A0A075B6I3 123 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 TRAV26-2A0A0B4J265 109 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 IGHV1-69DA0A0B4J2H0 117 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 IGHV1-69P01742 117 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 RRN3P1Q2M238 152 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 SFTA2Q6UW10 78 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 RNF182Q8N6D2 247 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 LINC01356Q8N9X3 169 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 PIFOQ8TCI5 191 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 DLX4Q92988 240 aaPredicted RBP5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 TM2D2Q9BX73 214 aa5.38□□□□□ -1.55
SRGAP3-213ENST00000618999 MYMXA0A1B0GTQ4 84 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 F8VRH5 84 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 CRYBA4P53673 196 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 C15orf32Q32M92 178 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 IGHV4-38-2P0DP08 117 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 OR10J6PQ8NGY7 276 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 SS18L2Q9UHA2 77 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 E9PLD3 99 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 LY6EQ16553 131 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 CLEC19AQ6UXS0 136 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 LCNL1Q6ZST4 164 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 EEF1AKMT3Q96AZ1 226 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 RNF185Q96GF1 192 aa5.37□□□□□ -1.55
SRGAP3-213ENST00000618999 MRPS12O15235 138 aaKnown RBP5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 TMEM219Q86XT9 240 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 MRAP2Q96G30 205 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 PPP1R17O96001 155 aa5.36□□□□□ -1.55
SRGAP3-213ENST00000618999 AVPP01185 164 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms