RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 TRAV8-2A0A0B4J237 113 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 A0A1B0GW15 77 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 C2orf70A6NJV1 201 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 J3KRW8 73 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 LGALS1P09382 135 aaKnown RBP4□□□□□ -1.77
GTDC1-220ENST00000618778 PMCHL1Q16048 86 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 Q6AWC8 147 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 ZNF493Q6ZR52 646 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 UBE2E2Q96LR5 201 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 METTL26Q96S19 204 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 SLC50A1Q9BRV3 221 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 VAMP8Q9BV40 100 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 TPPP3Q9BW30 176 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 KMT2CQ8NEZ4 4911 aaKnown RBP4□□□□□ -1.77
GTDC1-220ENST00000618778 IGHV1-24A0A0C4DH33 117 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 TMEM213A2RRL7 107 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 RBAKDNA6NC62 111 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 DLEU1O43261 78 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 BRI3O95415 125 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 ARL3P36405 182 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 CTRLP40313 264 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 CDKN1BP46527 198 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 ZNF138P52744 262 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 UNQ9165/PRO28630Q6UXU0 137 aa4□□□□□ -1.77
GTDC1-220ENST00000618778 CHCHD1Q96BP2 118 aaKnown RBP4□□□□□ -1.77
GTDC1-220ENST00000618778 IGLC6P0CF74 106 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 EGFEM1PQ0D2K5 195 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 SPATA12Q7Z6I5 190 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 OR1N2Q8NGR9 330 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 MRAPQ8TCY5 172 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 GLMPQ8WWB7 406 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 MIEN1Q9BRT3 115 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 SNHG12Q9BXW3 62 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 AGPAT4-IT1Q9H0P7 198 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 CLEC5AQ9NY25 188 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 TENM3Q9P273 2699 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 MUC21A0A0G2JKD1 596 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 MUC21A0A140T8X8 626 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 FABP5P3A8MUU1 101 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 H3BUA1 57 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 MUC21Q5SSG8 566 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 LINC00173Q6ZV60 143 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 MRPL53Q96EL3 112 aaKnown RBP3.99□□□□□ -1.77
GTDC1-220ENST00000618778 USMG5Q96IX5 58 aa3.99□□□□□ -1.77
GTDC1-220ENST00000618778 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 LINC01619G3V211 115 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 NDUFA4O00483 81 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 CRXO43186 299 aaPredicted RBP3.98□□□□□ -1.77
GTDC1-220ENST00000618778 ORM1P02763 201 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 CSN3P07498 182 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 RPS20P60866 119 aaKnown RBP3.98□□□□□ -1.77
GTDC1-220ENST00000618778 RPL11P62913 178 aaKnown RBP3.98□□□□□ -1.77
GTDC1-220ENST00000618778 SPATA45Q537H7 98 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 ZNF705AQ6ZN79 300 aaPredicted RBP3.98□□□□□ -1.77
GTDC1-220ENST00000618778 C9orf47Q6ZRZ4 202 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 GPHB5Q86YW7 130 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 AMN1Q8IY45 258 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 ATOH7Q8N100 152 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 FER1L6-AS1Q8NA97 138 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 TMEM70Q9BUB7 260 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 KRTAP4-2Q9BYR5 136 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 MSRB1Q9NZV6 116 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 IGKV3D-20A0A0C4DH25 116 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 TMEM238C9JI98 176 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 D6R8Y8 96 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 OVOL1O14753 267 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 SAP30O75446 220 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 LEPROTL1O95214 131 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 ZNF25P17030 456 aaPredicted RBP3.98□□□□□ -1.77
GTDC1-220ENST00000618778 SYNJ2BPP57105 145 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 MRPL51Q4U2R6 128 aaKnown RBP3.98□□□□□ -1.77
GTDC1-220ENST00000618778 ADAMTSL5Q6ZMM2 481 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 C20orf173Q96LM9 149 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 TMEM208Q9BTX3 173 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 C11orf21Q9P2W6 132 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 U3KQK5 164 aa3.98□□□□□ -1.77
GTDC1-220ENST00000618778 RYR3Q15413 4870 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 SYS1-DBNDD2H3BUS1 97 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 M0R143 59 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 SOCS3O14543 225 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 OR5AL1P0C617 328 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 IGLC3P0DOY3 106 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 IFI27P40305 119 aaPredicted RBP3.97□□□□□ -1.77
GTDC1-220ENST00000618778 TWIST1Q15672 202 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 FAM106AQ4KMX7 169 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 TMEM78Q5T7P6 136 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 Q6ZQT7 251 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 SMIM15Q7Z3B0 74 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 C16orf92Q96LL3 132 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 CNFNQ9BYD5 112 aa3.97□□□□□ -1.77
GTDC1-220ENST00000618778 TRAV9-2A0A087WT02 112 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 NPSP0C0P6 89 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 HIST1H1AQ02539 215 aaPredicted RBP3.96□□□□□ -1.77
GTDC1-220ENST00000618778 ORMDL3Q8N138 153 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 PRSS3P2Q8NHM4 247 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 DPF1Q92782 380 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 RNF185Q96GF1 192 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 PRELID3AQ96N28 172 aa3.96□□□□□ -1.77
GTDC1-220ENST00000618778 TMEM191AQ9H0A3 160 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms