RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 CRIP2P52943 208 aaPredicted RBP15.39■□□□□ 0.05
NEK3-208ENST00000618534 MTURNQ8N3F0 131 aa15.39■□□□□ 0.05
NEK3-208ENST00000618534 FAM19A4Q96LR4 140 aa15.39■□□□□ 0.05
NEK3-208ENST00000618534 IGHV3-11P01762 117 aa15.39■□□□□ 0.05
NEK3-208ENST00000618534 RNASE3P12724 160 aaKnown RBP15.39■□□□□ 0.05
NEK3-208ENST00000618534 BRD3OSQ6XYD6 125 aa15.39■□□□□ 0.05
NEK3-208ENST00000618534 MED14OSP0DP75 135 aa15.38■□□□□ 0.05
NEK3-208ENST00000618534 LCNL1Q6ZST4 164 aa15.38■□□□□ 0.05
NEK3-208ENST00000618534 SH2D6Q7Z4S9 175 aa15.38■□□□□ 0.05
NEK3-208ENST00000618534 ABCA2Q9BZC7 2435 aa15.38■□□□□ 0.05
NEK3-208ENST00000618534 HIVEP3Q5T1R4 2406 aa15.37■□□□□ 0.05
NEK3-208ENST00000618534 ETDBQ3ZM63 59 aa15.37■□□□□ 0.05
NEK3-208ENST00000618534 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
NEK3-208ENST00000618534 ZNF815PA8K554 130 aa15.36■□□□□ 0.05
NEK3-208ENST00000618534 DUSP14O95147 198 aaKnown RBP15.36■□□□□ 0.05
NEK3-208ENST00000618534 SCGB2A2Q13296 93 aa15.36■□□□□ 0.05
NEK3-208ENST00000618534 TSSC4Q9Y5U2 329 aaPredicted RBP15.36■□□□□ 0.05
NEK3-208ENST00000618534 MUC4Q99102 2169 aa15.36■□□□□ 0.05
NEK3-208ENST00000618534 GAGE13Q4V321 117 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 APRG1Q8IVJ8 170 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 PLEKHB2Q96CS7 222 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 PRO0461Q9UI25 63 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 CELSR1Q9NYQ6 3014 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 IGHV1-69DA0A0B4J2H0 117 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 IGHV1-69P01742 117 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 SAMD13Q5VXD3 122 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 DEFB104AQ8WTQ1 72 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 GTSF1LQ9H1H1 148 aa15.35■□□□□ 0.05
NEK3-208ENST00000618534 UCNP55089 124 aa15.34■□□□□ 0.05
NEK3-208ENST00000618534 LY6EQ16553 131 aa15.34■□□□□ 0.05
NEK3-208ENST00000618534 HOXA3O43365 443 aaPredicted RBP15.34■□□□□ 0.05
NEK3-208ENST00000618534 CRYGDP07320 174 aa15.34■□□□□ 0.05
NEK3-208ENST00000618534 COX6B1P14854 86 aa15.34■□□□□ 0.05
NEK3-208ENST00000618534 PGPEP1Q9NXJ5 209 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 PPP1R17O96001 155 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 AZU1P20160 251 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 LINC00315P59091 139 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 SCGB1D4Q6XE38 83 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 SPAG8Q99932 426 aaPredicted RBP15.33■□□□□ 0.04
NEK3-208ENST00000618534 RHPN1-AS1Q9BWJ2 59 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 KIF25-AS1Q9Y6Z4 181 aa15.33■□□□□ 0.04
NEK3-208ENST00000618534 NXPH4O95158 308 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 TSHBP01222 138 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 EMP1P54849 157 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 CD300EQ496F6 205 aaPredicted RBP15.32■□□□□ 0.04
NEK3-208ENST00000618534 POM121L12Q8N7R1 296 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 JPT2Q9H910 190 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 SRD5A1P18405 259 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 KLHL30-AS1Q8NEE0 82 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 TP53TG1Q9Y2A0 90 aa15.32■□□□□ 0.04
NEK3-208ENST00000618534 GAGE12HA6NDE8 117 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 C11orf86A6NJI1 115 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 PF4V1P10720 104 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 IGLV4-69A0A075B6H9 119 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 J3QR89 54 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 USMG5Q96IX5 58 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 SIGMAR1Q99720 223 aa15.31■□□□□ 0.04
NEK3-208ENST00000618534 MRPL16Q9NX20 251 aaKnown RBP15.31■□□□□ 0.04
NEK3-208ENST00000618534 SPTAN1Q13813 2472 aaKnown RBP15.3■□□□□ 0.04
NEK3-208ENST00000618534 IGHV4-39P01824 125 aa15.3■□□□□ 0.04
NEK3-208ENST00000618534 TRBV7-9A0A0J9YWB2 115 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 EDN2P20800 178 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 LINC01549A6NIU2 74 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 INSL3P51460 131 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 SMAGPQ0VAQ4 97 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 SRSF9Q13242 221 aaKnown RBP eCLIP15.29■□□□□ 0.04
NEK3-208ENST00000618534 SUMO4Q6EEV6 95 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 WFDC12Q8WWY7 111 aa15.29■□□□□ 0.04
NEK3-208ENST00000618534 IGHG2P01859 326 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 IGHV4-38-2P0DP08 117 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 RPL39P62891 51 aaKnown RBP15.28■□□□□ 0.04
NEK3-208ENST00000618534 ZFP2Q6ZN57 461 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 Q6ZS46 218 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 IGHV4OR15-8A0A075B7B6 117 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 A0A087WW49 117 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 A0A087WWL8 130 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 TMEM238LA0A1B0GVL6 79 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 IGIPA6NJ69 53 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 A6NJY4 79 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 KLLNB2CW77 178 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 C19orf84I3L1E1 186 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 UBE2D1P51668 147 aa15.28■□□□□ 0.04
NEK3-208ENST00000618534 H3BUA1 57 aa15.27■□□□□ 0.04
NEK3-208ENST00000618534 H3BUX3 64 aa15.27■□□□□ 0.04
NEK3-208ENST00000618534 POLR2KP53803 58 aaKnown RBP15.27■□□□□ 0.03
NEK3-208ENST00000618534 BLCAPP62952 87 aa15.27■□□□□ 0.03
NEK3-208ENST00000618534 SFTA2Q6UW10 78 aa15.27■□□□□ 0.03
NEK3-208ENST00000618534 FAM159AQ6UWV7 190 aa15.27■□□□□ 0.03
NEK3-208ENST00000618534 RPL32P62910 135 aaKnown RBP15.26■□□□□ 0.03
NEK3-208ENST00000618534 SPATA25Q9BR10 227 aa15.26■□□□□ 0.03
NEK3-208ENST00000618534 DAZ1Q9NQZ3 744 aaKnown RBP15.26■□□□□ 0.03
NEK3-208ENST00000618534 BRI3O95415 125 aa15.26■□□□□ 0.03
NEK3-208ENST00000618534 TSPAN13O95857 204 aa15.26■□□□□ 0.03
NEK3-208ENST00000618534 PMVKQ15126 192 aa15.26■□□□□ 0.03
NEK3-208ENST00000618534 VPS13CQ709C8 3753 aa15.25■□□□□ 0.03
NEK3-208ENST00000618534 IGHV4-61A0A0C4DH41 118 aa15.25■□□□□ 0.03
NEK3-208ENST00000618534 F5H697 171 aa15.25■□□□□ 0.03
NEK3-208ENST00000618534 HERVK_113P61574 105 aa15.25■□□□□ 0.03
NEK3-208ENST00000618534 A0A0J9YY99 117 aa15.24■□□□□ 0.03
NEK3-208ENST00000618534 A6NDX4 124 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms