RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 C11orf68Q9H3H3 251 aaKnown RBP5.72□□□□□ -1.49
PDE6A-205ENST00000617647 RETNQ9HD89 108 aa5.72□□□□□ -1.49
PDE6A-205ENST00000617647 ROS1P08922 2347 aa5.72□□□□□ -1.49
PDE6A-205ENST00000617647 IGLV2-11P01706 119 aa5.71□□□□□ -1.49
PDE6A-205ENST00000617647 TOMM6Q96B49 74 aa5.71□□□□□ -1.49
PDE6A-205ENST00000617647 AGPAT4-IT1Q9H0P7 198 aa5.71□□□□□ -1.49
PDE6A-205ENST00000617647 LAMA2P24043 3122 aaKnown RBP5.71□□□□□ -1.49
PDE6A-205ENST00000617647 E7EUB6 86 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 NEXN-AS1Q8NBZ9 246 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 CFHR4Q92496 578 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 GHRHP01286 108 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 CRYGAP11844 174 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 TEX36Q5VZQ5 186 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 Q6ZS52 159 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 CPAMD8Q8IZJ3 1885 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 TPSG1Q9NRR2 321 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 DOPEY2Q9Y3R5 2298 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 TRBV30A0A0K0K1B3 111 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 PF4P02776 101 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 CFHR1Q03591 330 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 SIT1Q9Y3P8 196 aa5.71□□□□□ -1.5
PDE6A-205ENST00000617647 REV3LO60673 3130 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 IGHG2P01859 326 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 TMEM263Q8WUH6 116 aaKnown RBP5.7□□□□□ -1.5
PDE6A-205ENST00000617647 NACAE9PAV3 2078 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 IGHV1OR15-9A0A0B4J2B8 117 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 CCL21O00585 134 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 DAZ2Q13117 558 aaKnown RBP5.7□□□□□ -1.5
PDE6A-205ENST00000617647 PDE6HQ13956 83 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 DAZ4Q86SG3 579 aaKnown RBP5.7□□□□□ -1.5
PDE6A-205ENST00000617647 IMMP1LQ96LU5 166 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 DAZ1Q9NQZ3 744 aaKnown RBP5.7□□□□□ -1.5
PDE6A-205ENST00000617647 DAZ3Q9NR90 486 aaKnown RBP5.7□□□□□ -1.5
PDE6A-205ENST00000617647 NDUFA12Q9UI09 145 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 NAV3Q8IVL0 2385 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 TRAV23DV6A0A075B6W5 121 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 USP17L23D6RBM5 183 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 RNF223E7ERA6 249 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 LEPROTO15243 131 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 PRB3Q04118 309 aaPredicted RBP5.7□□□□□ -1.5
PDE6A-205ENST00000617647 Q6ZT83 130 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 CCL17Q92583 94 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 TMEM141Q96I45 108 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 CTSZQ9UBR2 303 aa5.7□□□□□ -1.5
PDE6A-205ENST00000617647 MED13Q9UHV7 2174 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 SRRM5B3KS81 715 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 H3BRN7 92 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 VCYO14598 125 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 LINC01565O15544 149 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 CD28P10747 220 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 LOXP28300 417 aaPredicted RBP5.69□□□□□ -1.5
PDE6A-205ENST00000617647 ZNF80P51504 273 aaPredicted RBP5.69□□□□□ -1.5
PDE6A-205ENST00000617647 B3GALT5-AS1P59052 145 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 DYNAPQ8N1N2 210 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 TNRC6BQ9UPQ9 1833 aaKnown RBP5.69□□□□□ -1.5
PDE6A-205ENST00000617647 IGLV3-12A0A075B6K2 115 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 TRBV7-1A0A0A6YYK4 115 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 TRBV6-1A0A0K0K1D8 114 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 CXCL5P42830 114 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 C17orf58Q2M2W7 97 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 C1orf229Q6ZS94 237 aaPredicted RBP5.69□□□□□ -1.5
PDE6A-205ENST00000617647 HES7Q9BYE0 225 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 TRGV5A0A0B4J1U4 118 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 SOCS3O14543 225 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 RPL39P62891 51 aaKnown RBP5.69□□□□□ -1.5
PDE6A-205ENST00000617647 FAM19A4Q96LR4 140 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 U3KQE9 123 aa5.69□□□□□ -1.5
PDE6A-205ENST00000617647 I3L3M4 83 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 ZNF883P0CG24 379 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 TMEM30BQ3MIR4 351 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 LINC00336Q6ZUF6 198 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 IGKV3D-15A0A087WSY6 115 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 A0A087WVE0 104 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 IGKV3-15P01624 115 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 ELANEP08246 267 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 HOXD3P31249 432 aaPredicted RBP5.68□□□□□ -1.5
PDE6A-205ENST00000617647 SLC25A45Q8N413 288 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 DAND5Q8N907 189 aa5.68□□□□□ -1.5
PDE6A-205ENST00000617647 RNASE4P34096 147 aaKnown RBP5.67□□□□□ -1.5
PDE6A-205ENST00000617647 TTTY12Q9BZ98 90 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 A0A087WWL8 130 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 A0A0G2JNJ9 132 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 FAM90A1Q86YD7 464 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 RITA1Q96K30 269 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 Q9UFV3 132 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 AKAP6Q13023 2319 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 PINLYPA6NC86 204 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 LST1O00453 97 aa5.67□□□□□ -1.5
PDE6A-205ENST00000617647 SS18L1O75177 396 aaPredicted RBP5.67□□□□□ -1.5
PDE6A-205ENST00000617647 A0A0J9YXV3 536 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 IGHV5-10-1A0A0J9YXX1 117 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 NDUFC2-KCTD14E9PQ53 114 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 HTN1P15515 57 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 TRAV12-2A0A075B6T6 113 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 C17orf100A8MU93 164 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 CCL4P13236 92 aa5.66□□□□□ -1.5
PDE6A-205ENST00000617647 EBI3Q14213 229 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms