RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 TMEM14BQ9NUH8 114 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 KLK5Q9Y337 293 aaPredicted RBP6.36□□□□□ -1.39
GPC6-202ENST00000617456 F11RQ9Y624 299 aaKnown RBP6.36□□□□□ -1.39
GPC6-202ENST00000617456 KIAA1109Q2LD37 5005 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 NDUFA4O00483 81 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 SERF1AO75920 110 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 CRISP2P16562 243 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 NTF3P20783 257 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 GPR183P32249 361 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 EMP1P54849 157 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 CMC4P56277 68 aaPredicted RBP6.35□□□□□ -1.39
GPC6-202ENST00000617456 KRTDAPP60985 99 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 WT1-ASQ06250 92 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 SPATA12Q7Z6I5 190 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 OR51H1Q8NH63 302 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 GATAD1Q8WUU5 269 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 DAZ1Q9NQZ3 744 aaKnown RBP6.35□□□□□ -1.39
GPC6-202ENST00000617456 TP53TG1Q9Y2A0 90 aa6.35□□□□□ -1.39
GPC6-202ENST00000617456 TRAV3A0A0B4J244 114 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 C15orf61A6NNL5 157 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 C15orf62A8K5M9 175 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 H3BMG7 143 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 ISLRO14498 428 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 LINC00694P0DN24 101 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 ASIPP42127 132 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 PPP1R1AQ13522 171 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 AMTNQ6UX39 209 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 ATOH7Q8N100 152 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 TMEM190Q8WZ59 177 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 KCNS1Q96KK3 526 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 GPHA2Q96T91 129 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
GPC6-202ENST00000617456 LSM5Q9Y4Y9 91 aaKnown RBP6.34□□□□□ -1.39
GPC6-202ENST00000617456 SYS1-DBNDD2H3BUS1 97 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 PAGE4O60829 102 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 PITX3O75364 302 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 ZNF324O75467 553 aaPredicted RBP6.33□□□□□ -1.4
GPC6-202ENST00000617456 CXorf1O96002 111 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 CA1P00915 261 aaPredicted RBP6.33□□□□□ -1.4
GPC6-202ENST00000617456 ERHP84090 104 aaKnown RBP6.33□□□□□ -1.4
GPC6-202ENST00000617456 GAGE2BQ13066 116 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 GAGE2EQ4V326 116 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 TTC32Q5I0X7 151 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 LHFPL1Q86WI0 220 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 WFDC3Q8IUB2 231 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 FAM219AQ8IW50 185 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 TMEM61Q8N0U2 210 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 GAGE2DQ9UEU5 116 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 PRO0461Q9UI25 63 aa6.33□□□□□ -1.4
GPC6-202ENST00000617456 GGTLC3B5MD39 225 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 H3BUT2 72 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 K7EIM0 57 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 SPRY2O43597 315 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 IGHV3-23P01764 117 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 MT-ND6P03923 174 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 CD3DP04234 171 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 CTSGP08311 255 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 GCSHP23434 173 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 CAMPP49913 170 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 CCL20P78556 96 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 PRCDQ00LT1 54 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 DEFB135Q30KP9 77 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 PVRIGQ6DKI7 326 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 UNQ9165/PRO28630Q6UXU0 137 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 GATD1Q8NB37 220 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 SCGB1C1Q8TD33 95 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 PHLDA1Q8WV24 401 aaPredicted RBP6.32□□□□□ -1.4
GPC6-202ENST00000617456 GTSF1Q8WW33 167 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 SCGB3A2Q96PL1 93 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 ATP5SQ99766 215 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 NSG2Q9Y328 171 aa6.32□□□□□ -1.4
GPC6-202ENST00000617456 PIGBOS1A0A0B4J2F0 54 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 PRSS29PA6NIE9 313 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 F8W735 103 aaPredicted RBP6.31□□□□□ -1.4
GPC6-202ENST00000617456 I3L2K1 104 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 BCL2P10415 239 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 GATA2P23769 480 aaPredicted RBP6.31□□□□□ -1.4
GPC6-202ENST00000617456 ADMP35318 185 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 SUB1P53999 127 aaKnown RBP eCLIP6.31□□□□□ -1.4
GPC6-202ENST00000617456 APOC4P55056 127 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 RPL23P62829 140 aaKnown RBP6.31□□□□□ -1.4
GPC6-202ENST00000617456 LGALS9CQ6DKI2 356 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 FAM213BQ8TBF2 198 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 BORCS7Q96B45 105 aa6.31□□□□□ -1.4
GPC6-202ENST00000617456 TRAV2A0A0B4J234 112 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 A0A1W2PS18 150 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 NPIPB6E9PJ23 425 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 NCR2O95944 276 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 IGKV1-39P01597 117 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 IGKV1D-39P04432 117 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 SLC25A5P05141 298 aaKnown RBP6.3□□□□□ -1.4
GPC6-202ENST00000617456 P0C879 139 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 COX8AP10176 69 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 NKX2-1P43699 371 aaPredicted RBP6.3□□□□□ -1.4
GPC6-202ENST00000617456 MFAP2P55001 183 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 GNG5P63218 68 aa6.3□□□□□ -1.4
GPC6-202ENST00000617456 VWC2Q2TAL6 325 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms