RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PCNX1Q96RV3 2341 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 ARFGEF1Q9Y6D6 1849 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 CCL24O00175 119 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 LMO1P25800 156 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 B9D2Q9BPU9 175 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 PDCD11Q14690 1871 aaKnown RBP4.71□□□□□ -1.66
RFX3-212ENST00000617270 SPART-AS1P0CW21 52 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 DIRC1Q969H9 104 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 VPREB3Q9UKI3 123 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 TRAV23DV6A0A075B6W5 121 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 J3QLI3 93 aa4.71□□□□□ -1.66
RFX3-212ENST00000617270 RPL39P62891 51 aaKnown RBP4.7□□□□□ -1.66
RFX3-212ENST00000617270 UPK3BQ9BT76 320 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 IGLV3-9A0A075B6K5 115 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 Q6ZS92 163 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 ZNF236Q9UL36 1845 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 TRBV10-2A0A0K0K1G8 114 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 WISP1O95388 367 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 TRPM3Q9HCF6 1732 aaPredicted RBP4.7□□□□□ -1.66
RFX3-212ENST00000617270 HOXB4P17483 251 aaPredicted RBP4.7□□□□□ -1.66
RFX3-212ENST00000617270 K7EM74 188 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 PRR20EP86478 221 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 PRR20CP86479 221 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 PRR20DP86480 221 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 PRR20BP86481 221 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 PRR20AP86496 221 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 TTTY13Q9BZ97 58 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 PSME4Q14997 1843 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 Q6ZR03 302 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 RNF138Q8WVD3 245 aa4.7□□□□□ -1.66
RFX3-212ENST00000617270 JMJD7-PLA2G4BH0Y9G9 81 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 SPAG11BQ08648 103 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 CDPF1Q6NVV7 123 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 WI2-2373I1.2A0A1W2PRP0 233 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 DEFB135Q30KP9 77 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 DEFB112Q30KQ8 113 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 LINC01545Q5VT33 79 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 HIGD2AQ9BW72 106 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 GPHB5Q86YW7 130 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 ZNF491Q8N8L2 437 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 IGHV4-30-2A0A087WSY4 118 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 DAZ2Q13117 558 aaKnown RBP4.69□□□□□ -1.66
RFX3-212ENST00000617270 LINC00173Q6ZV60 143 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 DAZ4Q86SG3 579 aaKnown RBP4.69□□□□□ -1.66
RFX3-212ENST00000617270 DAZ3Q9NR90 486 aaKnown RBP4.69□□□□□ -1.66
RFX3-212ENST00000617270 HEATR5AQ86XA9 2040 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 PHF3Q92576 2039 aaKnown RBP4.69□□□□□ -1.66
RFX3-212ENST00000617270 FXYD2P54710 66 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 FOXI1Q12951 378 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 GTSF1Q8WW33 167 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 PATJQ8NI35 1801 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 ATAD5Q96QE3 1844 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 A0A0J9YWU9 116 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 J3QKU1 62 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 FGF23Q9GZV9 251 aaPredicted RBP4.69□□□□□ -1.66
RFX3-212ENST00000617270 KLK12Q9UKR0 248 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 WFDC2Q14508 124 aa4.69□□□□□ -1.66
RFX3-212ENST00000617270 C9orf66Q5T8R8 295 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 H3BQ85 93 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 IGHV2-5P01817 119 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 COX7BP24311 80 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 WFDC10BQ8IUB3 73 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 MSRB1Q9NZV6 116 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 THADAQ6YHU6 1953 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 BPY2O14599 106 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 SCXQ7RTU7 201 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 TNCP24821 2201 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 DOCK6Q96HP0 2047 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 GBF1Q92538 1859 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 MIR7-3HGQ8N6C7 128 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 FAM208BQ5VWN6 2430 aa4.68□□□□□ -1.66
RFX3-212ENST00000617270 SHANK1Q9Y566 2161 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 TRAV26-1A0A087WT03 109 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 H3BUA1 57 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 CHD3Q12873 2000 aaKnown RBP4.67□□□□□ -1.66
RFX3-212ENST00000617270 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 C15orf65H3BRN8 121 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 C20orf197Q8N268 126 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 LINC00311Q8N616 119 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 Q8N1Y9 231 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 RNF152Q8N8N0 203 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 PTH2Q96A98 100 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 TEX49A0A1B0GTD5 131 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 FAM240AA0A1B0GVK7 77 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 SDIM1Q6ZPB5 146 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 FOXL2NBQ6ZUU3 175 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 TRBV7-3A0A075B6L6 115 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 CXCL5P42830 114 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 Q6ZUT4 128 aa4.67□□□□□ -1.66
RFX3-212ENST00000617270 RNASE8Q8TDE3 154 aaKnown RBP4.67□□□□□ -1.66
RFX3-212ENST00000617270 TMEM256-PLSCR3K7ERE1 68 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 DOCK3Q8IZD9 2030 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 ZNF503-AS2A6NEH8 195 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 IL15RAQ13261 267 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 DOCK8Q8NF50 2099 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 DOPEY1Q5JWR5 2465 aa4.66□□□□□ -1.66
RFX3-212ENST00000617270 K7ENP7 123 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms