RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 MSRB2Q9Y3D2 182 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 DMXL1Q9Y485 3027 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 CCDC179H3BU77 68 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 CRIP2P52943 208 aaPredicted RBP5.13□□□□□ -1.59
LMO3-235ENST00000616247 RPL39P62891 51 aaKnown RBP5.13□□□□□ -1.59
LMO3-235ENST00000616247 NDUFA11Q86Y39 141 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 PRO1854Q9UHT4 67 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 TP53TG1Q9Y2A0 90 aa5.13□□□□□ -1.59
LMO3-235ENST00000616247 A0A087WWL8 130 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 CDX4O14627 284 aaPredicted RBP5.12□□□□□ -1.59
LMO3-235ENST00000616247 RASL10AQ92737 203 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 IGLV2-18A0A075B6J9 118 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 A4D1N5 150 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 TIMD4Q96H15 378 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 ANKRD11Q6UB99 2663 aaPredicted RBP5.12□□□□□ -1.59
LMO3-235ENST00000616247 NACAE9PAV3 2078 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 IGLV11-55A0A075B6I3 123 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 TRAV8-4A0A0B4J246 113 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 E7EQL1 145 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 IGKV3-20P01619 116 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 IGHG4P01861 327 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 SRD5A1P18405 259 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 SHISA2Q6UWI4 295 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 C15orf53Q8NAA6 179 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 LINC01560Q8TB33 94 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 METTL26Q96S19 204 aa5.12□□□□□ -1.59
LMO3-235ENST00000616247 A0A0G2JNJ9 132 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 F6UB75 175 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 G3V318 75 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 GNRH2O43555 120 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 CRLF1O75462 422 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 CFC1P0CG37 223 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 IFITM1P13164 125 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 ASIPP42127 132 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 FAM159AQ6UWV7 190 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 C10orf126Q8N4M7 172 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 NUP37Q8NFH4 326 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 ATP6V0E2Q8NHE4 81 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 AJUBAQ96IF1 538 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 SLC50A1Q9BRV3 221 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 Q9UFV3 132 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 C8orf31Q8N9H6 132 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 NEXN-AS1Q8NBZ9 246 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 OPRPNQ99935 248 aaPredicted RBP5.11□□□□□ -1.59
LMO3-235ENST00000616247 VCX2Q9H322 139 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 DPH3P1Q9H4G8 78 aa5.11□□□□□ -1.59
LMO3-235ENST00000616247 A0A0J9YY99 117 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 TEX49A0A1B0GTD5 131 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 HTN1P15515 57 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 NDUFV3P56181 108 aaKnown RBP5.1□□□□□ -1.59
LMO3-235ENST00000616247 ZNF56Q15929 161 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 OR10J6PQ8NGY7 276 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 JPT2Q9H910 190 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 MAP1AP78559 2803 aaPredicted RBP5.1□□□□□ -1.59
LMO3-235ENST00000616247 SPENQ96T58 3664 aaKnown RBP5.1□□□□□ -1.59
LMO3-235ENST00000616247 TRBV7-9A0A0J9YWB2 115 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 CD3EP07766 207 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 MEIG1Q5JSS6 88 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 TOMM6Q96B49 74 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 TRAV12-1A0A0B4J245 112 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 IGHV7-4-1A0A0J9YVY3 117 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 F8W735 103 aaPredicted RBP5.1□□□□□ -1.59
LMO3-235ENST00000616247 J3QQQ9 107 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 BUB3O43684 328 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 THBDP07204 575 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 ZNF883P0CG24 379 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 UBE2D1P51668 147 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 C2orf82Q6UX34 121 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 Q8N1Y9 231 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 LAMA5O15230 3695 aa5.1□□□□□ -1.59
LMO3-235ENST00000616247 CEP295Q9C0D2 2601 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 LRBAP50851 2863 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 TRAV12-3A0A0B4J271 114 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 A0A0U1RRA0 63 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.09□□□□□ -1.59
LMO3-235ENST00000616247 CD7P09564 240 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 PRR9Q5T870 116 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 CNFNQ9BYD5 112 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 ATRXP46100 2492 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 IGHV3OR16-10A0A075B7F0 116 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 AVPP01185 164 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 IGHV3-11P01762 117 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 PMVKQ15126 192 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 KAAG1Q9UBP8 84 aa5.09□□□□□ -1.59
LMO3-235ENST00000616247 TSPEAR-AS2P59090 65 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 UBE2D3P61077 147 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 UBE2D2P62837 147 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 ZNF672Q499Z4 452 aaPredicted RBP5.08□□□□□ -1.6
LMO3-235ENST00000616247 DUX3Q96PT4 197 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 RNF5Q99942 180 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 SPXQ9BT56 116 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 CSPG4Q6UVK1 2322 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 TRAV21A0A0B4J279 112 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
LMO3-235ENST00000616247 FAM57AQ8TBR7 257 aa5.08□□□□□ -1.6
LMO3-235ENST00000616247 CUL9Q8IWT3 2517 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms