RNA–Protein interactions for RNA: ENST00000615442.1

PVT1-223, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 165 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-223	ENST00000615442	ERVFC1-1	P60608	527 aa		7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	RPL23	P62829	140 aa	Known RBP	7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	ZNF876P	Q49A33	203 aa		7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	CASC10	Q5T4H9	136 aa		7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	ZFAND6	Q6FIF0	208 aa		7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	RNASE7	Q9H1E1	156 aa	Known RBP	7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	RPP21	Q9H633	154 aa	Known RBP	7.43	□□□□□ -1.22
PVT1-223	ENST00000615442	TENM3	Q9P273	2699 aa		7.43	□□□□□ -1.22
PVT1-223	ENST00000615442		H3BVH4	76 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	CIDEA	O60543	219 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	OR5AL1	P0C617	328 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	COMMD7	Q86VX2	200 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	SYT8	Q8NBV8	401 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	FAM210B	Q96KR6	192 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	OSTC	Q9NRP0	149 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442	PHLDA3	Q9Y5J5	127 aa		7.42	□□□□□ -1.22
PVT1-223	ENST00000615442		A0A1W2PPQ1	181 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	TMEM218	A2RU14	115 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442		F2Z2F3	143 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	SNAI2	O43623	268 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	GATC	O43716	136 aa	Known RBP	7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	IGLC6	P0CF74	106 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	HTN3	P15516	51 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	TCTA	P57738	103 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	CT83	Q5H943	113 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	ZFP82	Q8N141	532 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	C15orf54	Q8N8G6	183 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	OR4C5	Q8NGB2	326 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	ISOC2	Q96AB3	205 aa		7.41	□□□□□ -1.22
PVT1-223	ENST00000615442	TRAV4	A0A0B4J268	109 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442		A8MWL6	223 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442		A8MWV9	139 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442		F5H768	121 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	RS1	O15537	224 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	PNRC1	Q12796	327 aa	Predicted RBP	7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	ADIRF	Q15847	76 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	DMRTA1	Q5VZB9	504 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	FER1L6-AS1	Q8NA97	138 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	SFRP2	Q96HF1	295 aa		7.4	□□□□□ -1.22
PVT1-223	ENST00000615442	TG	P01266	2768 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	IGLL5	B9A064	214 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	NXPH4	O95158	308 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	GZMB	P10144	247 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	HOXA5	P20719	270 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	FOXA3	P55318	350 aa	Predicted RBP	7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	CACNG7	P62955	275 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	SLA	Q13239	276 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	FHL2	Q14192	279 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	CFAP126	Q5VTH2	177 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	WDR73	Q6P4I2	378 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	POM121L12	Q8N7R1	296 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	OR10G8	Q8NGN5	311 aa		7.39	□□□□□ -1.23
PVT1-223	ENST00000615442	IGHV4-4	A0A075B6R2	117 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	FAM231B	A6NCW3	169 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442		F8W036	122 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442		H3BNG1	76 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442		M0R381	172 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	IGHV3-53	P01767	116 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	SPANXN1	Q5VSR9	72 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	ZFP2	Q6ZN57	461 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	OR10AG1	Q8NH19	301 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	TSKU	Q8WUA8	353 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	ZNF479	Q96JC4	524 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	SEC11C	Q9BY50	192 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	GFRA4	Q9GZZ7	299 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	HHLA3	Q9XRX5	114 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442		V9GYV3	84 aa		7.38	□□□□□ -1.23
PVT1-223	ENST00000615442	TRGV4	A0A0C4DH28	118 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	CTRL	P40313	264 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	TMEM88	Q6PEY1	159 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	LYZL1	Q6UWQ5	148 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	GTSF1	Q8WW33	167 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	TPPP3	Q9BW30	176 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	CNFN	Q9BYD5	112 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	PRO0255	Q9UI72	69 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	APLN	Q9ULZ1	77 aa		7.37	□□□□□ -1.23
PVT1-223	ENST00000615442	TRAV26-1	A0A087WT03	109 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	MUC21	A0A0G2JKD1	596 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	MUC21	A0A140T8X8	626 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	RHOD	O00212	210 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	PPP1R2P9	O14990	202 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	ADCYAP1	P18509	176 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	CRYBA4	P53673	196 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	C10orf91	Q5T1B1	145 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	UFSP1	Q6NVU6	142 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	C15orf53	Q8NAA6	179 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	STAB2	Q8WWQ8	2551 aa		7.36	□□□□□ -1.23
PVT1-223	ENST00000615442	TRBV6-4	A0A1B0GX49	114 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	PAX4	O43316	350 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	MT-ND4L	P03901	98 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	CRYGD	P07320	174 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	NTF3	P20783	257 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	ANAPC16	Q96DE5	110 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	VSIG2	Q96IQ7	327 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	SAMD10	Q9BYL1	202 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442	JPT2	Q9H910	190 aa		7.35	□□□□□ -1.23
PVT1-223	ENST00000615442		A0A0J9YY99	117 aa		7.34	□□□□□ -1.23
PVT1-223	ENST00000615442	SMIM27	A0A1W2PRY6	76 aa		7.34	□□□□□ -1.23
PVT1-223	ENST00000615442	HIGD1C	A8MV81	97 aa		7.34	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms