RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PLXNB1O43157 2135 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 HHLA3Q9XRX5 114 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 U3KQK5 164 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 IGKCP01834 107 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 TCRAP04437 139 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 IL17RELQ6ZVW7 336 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 HIST1H4GQ99525 98 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 FBXL15Q9H469 300 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 HIGD1AQ9Y241 93 aa10.11□□□□□ -0.79
FOXN3-219ENST00000615335 HOXA3O43365 443 aaPredicted RBP10.1□□□□□ -0.79
FOXN3-219ENST00000615335 FAM106CPP0CH98 169 aa10.1□□□□□ -0.79
FOXN3-219ENST00000615335 FAM106AQ4KMX7 169 aa10.1□□□□□ -0.79
FOXN3-219ENST00000615335 ZNF493Q6ZR52 646 aa10.1□□□□□ -0.79
FOXN3-219ENST00000615335 PPP1R27Q86WC6 154 aa10.1□□□□□ -0.79
FOXN3-219ENST00000615335 SRSF8Q9BRL6 282 aaKnown RBP10.1□□□□□ -0.79
FOXN3-219ENST00000615335 TEX22C9J3V5 150 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 WIPF1O43516 503 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 FSHBP01225 129 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 LYZP61626 148 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 HIVEP1P15822 2718 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 SBSPONQ8IVN8 264 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 PPDPFQ9H3Y8 114 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 HIVEP2P31629 2446 aa10.09□□□□□ -0.79
FOXN3-219ENST00000615335 A8MWV9 139 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 TWIST1Q15672 202 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 DEFB112Q30KQ8 113 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 MEIG1Q5JSS6 88 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 ORMDL3Q8N138 153 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 RNF5Q99942 180 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 CSDC2Q9Y534 153 aaKnown RBP10.08□□□□□ -0.8
FOXN3-219ENST00000615335 MTORP42345 2549 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 TRBV20-1A0A075B6N2 111 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 LOC389332A0A1B0GUA5 103 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
FOXN3-219ENST00000615335 SCGB2A1O75556 95 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 PLGLAQ15195 96 aa10.08□□□□□ -0.8
FOXN3-219ENST00000615335 MORN3Q6PF18 240 aaPredicted RBP10.08□□□□□ -0.8
FOXN3-219ENST00000615335 DPM2O94777 84 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 LY6G6DO95868 133 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 ARMS2P0C7Q2 107 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 EBI3Q14213 229 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 ANXA2RQ3ZCQ2 193 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 FAM159AQ6UWV7 190 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 SRSF12Q8WXF0 261 aaKnown RBP10.07□□□□□ -0.8
FOXN3-219ENST00000615335 RASL11BQ9BPW5 248 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 SLC25A39Q9BZJ4 359 aaPredicted RBP10.07□□□□□ -0.8
FOXN3-219ENST00000615335 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 TRBV7-3A0A075B6L6 115 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 NBR2O15453 112 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 ATP5LO75964 103 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 C9orf139Q6ZV77 190 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 Q86TA4 180 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 OR10J6PQ8NGY7 276 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 KIR2DL4Q99706 377 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 TTTY13Q9BZ97 58 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 MDFICQ9P1T7 246 aa10.07□□□□□ -0.8
FOXN3-219ENST00000615335 D6R8Y8 96 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 H3BUX3 64 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 I3L2K1 104 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 PSMB2P49721 201 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 DNAJC30Q96LL9 226 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 TRAV8-1A0A0A6YYK1 113 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 LY6EQ16553 131 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 GOLT1AQ6ZVE7 132 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 PRNTQ86SH4 94 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 EXOC3-AS1Q8N2X6 119 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 TMEM190Q8WZ59 177 aa10.06□□□□□ -0.8
FOXN3-219ENST00000615335 TRAV25A0A0B4J276 109 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 CYSRT1A8MQ03 144 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 K7EMI3 77 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 TMEM78Q5T7P6 136 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 ZC2HC1BQ5TFG8 222 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 TMEM219Q86XT9 240 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 Q8N6K4 173 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 NPBQ8NG41 125 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 FCER1GP30273 86 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 Q71RC1 249 aaPredicted RBP10.05□□□□□ -0.8
FOXN3-219ENST00000615335 GTSCR1Q86UQ5 136 aa10.05□□□□□ -0.8
FOXN3-219ENST00000615335 TRBV6-1A0A0K0K1D8 114 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 MYMXA0A1B0GTQ4 84 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 NDUFA3O95167 84 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 UBE2D3P61077 147 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 UBE2D2P62837 147 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 IGKV1-17P01599 117 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 IGLV2-11P01706 119 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 IGHV4-59P01825 116 aa10.04□□□□□ -0.8
FOXN3-219ENST00000615335 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 LINC01546A6NGU7 62 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 PRSS1P07477 247 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 TMEM160Q9NX00 188 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 F8P00451 2351 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 SCGB1C2P0DMR2 95 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 Q6YL49 198 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 ANKRD29Q8N6D5 301 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 RASL10AQ92737 203 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 SHANK2-AS3Q9BTD1 123 aa10.03□□□□□ -0.8
FOXN3-219ENST00000615335 TRBV19A0A075B6N1 114 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms