RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 LRRK2Q5S007 2527 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 FAM208BQ5VWN6 2430 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 PPP1R17O96001 155 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 GATA3P23771 443 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
ATF3-211ENST00000613954 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 ECSCRQ19T08 205 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 ETDBQ3ZM63 59 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 LRRC75A-AS1Q8N1F1 130 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 SPAG8Q99932 426 aaPredicted RBP8.53□□□□□ -1.04
ATF3-211ENST00000613954 A0A096LNT2 108 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 M0R381 172 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 DEFB113Q30KQ7 82 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 ATP6V0E2Q8NHE4 81 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
ATF3-211ENST00000613954 ABCA2Q9BZC7 2435 aa8.52□□□□□ -1.04
ATF3-211ENST00000613954 IGHV3OR16-10A0A075B7F0 116 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 LINC01549A6NIU2 74 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 H3BVH4 76 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 CLEC19AQ6UXS0 136 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 C9orf139Q6ZV77 190 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 LINC01356Q8N9X3 169 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 CCDC140Q96MF4 163 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 U3KQE9 123 aa8.52□□□□□ -1.05
ATF3-211ENST00000613954 WNK2Q9Y3S1 2297 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 IGHV3-66A0A0C4DH42 116 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 LGALS1P09382 135 aaKnown RBP8.51□□□□□ -1.05
ATF3-211ENST00000613954 MED14OSP0DP75 135 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 LYRM7Q5U5X0 104 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 SH2D6Q7Z4S9 175 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 C16orf92Q96LL3 132 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 LINC00477Q96M19 166 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 TRAV21A0A0B4J279 112 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 ATP6V0E1O15342 81 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 IGHV4-38-2P0DP08 117 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 TCTEX1D4Q5JR98 221 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 AMTNQ6UX39 209 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 DLX4Q92988 240 aaPredicted RBP8.51□□□□□ -1.05
ATF3-211ENST00000613954 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
ATF3-211ENST00000613954 MED13LQ71F56 2210 aa8.5□□□□□ -1.05
ATF3-211ENST00000613954 AGRNO00468 2067 aa8.5□□□□□ -1.05
ATF3-211ENST00000613954 APOMO95445 188 aa8.5□□□□□ -1.05
ATF3-211ENST00000613954 PAPPA-AS1Q5QFB9 102 aa8.5□□□□□ -1.05
ATF3-211ENST00000613954 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
ATF3-211ENST00000613954 MRPL16Q9NX20 251 aaKnown RBP8.5□□□□□ -1.05
ATF3-211ENST00000613954 SPG11Q96JI7 2443 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 J3QLI3 93 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 S100A4P26447 101 aaKnown RBP8.49□□□□□ -1.05
ATF3-211ENST00000613954 ASIPP42127 132 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
ATF3-211ENST00000613954 BAALCQ8WXS3 180 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 RASL10AQ92737 203 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 FBN2P35556 2912 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 OVOL1O14753 267 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 PRADC1Q9BSG0 188 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 C1QTNF4Q9BXJ3 329 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 KLK15Q9H2R5 256 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 PHLDA3Q9Y5J5 127 aa8.49□□□□□ -1.05
ATF3-211ENST00000613954 ASH1LQ9NR48 2969 aaKnown RBP8.48□□□□□ -1.05
ATF3-211ENST00000613954 CHD6Q8TD26 2715 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 RNF223E7ERA6 249 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 HERVK_113P61574 105 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 ATP5G2Q06055 141 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 FOXI1Q12951 378 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 CFAP126Q5VTH2 177 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 OR10J6PQ8NGY7 276 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 MOB4Q9Y3A3 225 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 CRYBG3Q68DQ2 2970 aa8.48□□□□□ -1.05
ATF3-211ENST00000613954 PRSS29PA6NIE9 313 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 UBE2D1P51668 147 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 SRSF9Q13242 221 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATF3-211ENST00000613954 C5orf56Q8N8D9 126 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 GLMPQ8WWB7 406 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 VCX2Q9H322 139 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 USP9YO00507 2555 aaPredicted RBP8.47□□□□□ -1.05
ATF3-211ENST00000613954 J3KRW8 73 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 AVPP01185 164 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
ATF3-211ENST00000613954 PRR9Q5T870 116 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 LCNL1Q6ZST4 164 aa8.47□□□□□ -1.05
ATF3-211ENST00000613954 IGHV3-49A0A0A0MS15 119 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 TRBV7-9A0A0J9YWB2 115 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 FAM223BA6NKX1 122 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 TGFAP01135 160 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 TMEM219Q86XT9 240 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 FAM223AQ8IWN6 122 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 ZFAND2AQ8N6M9 145 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 POM121L12Q8N7R1 296 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 MAPK1IP1LQ8NDC0 245 aa8.46□□□□□ -1.05
ATF3-211ENST00000613954 G3V318 75 aa8.46□□□□□ -1.06
ATF3-211ENST00000613954 IGHV4-31P0DP07 118 aa8.46□□□□□ -1.06
ATF3-211ENST00000613954 CKS1BP61024 79 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms