RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 LINC01620Q4KN68 170 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 TM2D2Q9BX73 214 aa6.77□□□□□ -1.33
PDE6A-204ENST00000613228 CNTRLQ7Z7A1 2325 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 NCKAP5O14513 1909 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 IGHV1OR15-1A0A075B7D0 117 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 IGHV4-38-2P0DP08 117 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 MED14OSP0DP75 135 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 ZNF295-AS1Q8N0V1 137 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 UBE2E2Q96LR5 201 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 H3BT86 120 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 GHRHP01286 108 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 MRPL51Q4U2R6 128 aaKnown RBP6.76□□□□□ -1.33
PDE6A-204ENST00000613228 LINC00643Q86TS7 51 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 CFHR4Q92496 578 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 IMUPQ9GZP8 106 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 PROP1O75360 226 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 GPHB5Q86YW7 130 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 PIFOQ8TCI5 191 aa6.76□□□□□ -1.33
PDE6A-204ENST00000613228 EML6Q6ZMW3 1958 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 ALPK2Q86TB3 2170 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 URB1O60287 2271 aaKnown RBP6.75□□□□□ -1.33
PDE6A-204ENST00000613228 KMT2EQ8IZD2 1858 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 IGHV4-59P01825 116 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 C22orf34Q6ZV56 151 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 Q8N976 141 aa6.75□□□□□ -1.33
PDE6A-204ENST00000613228 IGF1P05019 195 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 RPL36AP83881 106 aaKnown RBP6.74□□□□□ -1.33
PDE6A-204ENST00000613228 RPL36ALQ969Q0 106 aaKnown RBP6.74□□□□□ -1.33
PDE6A-204ENST00000613228 TNRC6AQ8NDV7 1962 aaKnown RBP6.74□□□□□ -1.33
PDE6A-204ENST00000613228 BUB3O43684 328 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 C4orf3Q8WVX3 66 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 DEFB131AP59861 70 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 IGFL4Q6B9Z1 124 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 C9orf47Q6ZRZ4 202 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 C2orf91Q6ZV80 131 aa6.74□□□□□ -1.33
PDE6A-204ENST00000613228 EML5Q05BV3 1969 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 IGKV1D-37A0A075B6S9 117 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 SEC61GP60059 68 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 MORN5Q5VZ52 161 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 TRGV4A0A0C4DH28 118 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 C19orf84I3L1E1 186 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 CD28P10747 220 aa6.73□□□□□ -1.33
PDE6A-204ENST00000613228 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
PDE6A-204ENST00000613228 FAM19A5Q7Z5A7 132 aaPredicted RBP6.73□□□□□ -1.33
PDE6A-204ENST00000613228 Q8N6K4 173 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 FAM236DA0A1B0GTK5 79 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 FAM236CP0DP71 79 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 CFAP126Q5VTH2 177 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 Q8N1Y9 231 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 VWC2LB2RUY7 222 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 CRPP02741 224 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 HOXD3P31249 432 aaPredicted RBP6.72□□□□□ -1.33
PDE6A-204ENST00000613228 PPDPFQ9H3Y8 114 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 TCL1BO95988 128 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 C1orf229Q6ZS94 237 aaPredicted RBP6.72□□□□□ -1.33
PDE6A-204ENST00000613228 DYNAPQ8N1N2 210 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 IGKV1OR2-108A0A075B7D4 117 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 C14orf178Q8N769 122 aaPredicted RBP6.72□□□□□ -1.33
PDE6A-204ENST00000613228 ODF3Q96PU9 254 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 UBL5Q9BZL1 73 aa6.72□□□□□ -1.33
PDE6A-204ENST00000613228 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.33
PDE6A-204ENST00000613228 I3L3M4 83 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 LGALS9O00182 355 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 APOC4P55056 127 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 AGPAT4-IT1Q9H0P7 198 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 E7EUB6 86 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 COX7CP15954 63 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 TIMM21Q9BVV7 248 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 HRCT1Q6UXD1 115 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 Q6YL49 198 aa6.71□□□□□ -1.34
PDE6A-204ENST00000613228 PTPRZ1P23471 2315 aaPredicted RBP6.7□□□□□ -1.34
PDE6A-204ENST00000613228 MED12Q93074 2177 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 IGHV3-64A0A075B6Q5 118 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 ADARB2-AS1A8MUL3 147 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 ZNF493Q6ZR52 646 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 TP73-AS1Q9UF72 201 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 FAM240AA0A1B0GVK7 77 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 ZNF843Q8N446 348 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 C17orf77Q96MU5 243 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 TRGV1A0A0A0MS02 117 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 TRAV12-1A0A0B4J245 112 aa6.7□□□□□ -1.34
PDE6A-204ENST00000613228 A0A0U1RQV1 116 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 hADV29S1A0JD25 119 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 LEPROTO15243 131 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 PRB1P04280 392 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 FRMD6-AS1P0C7T7 363 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 IGHV4-31P0DP07 118 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 ZNF876PQ49A33 203 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 DNAJC13O75165 2243 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 MYCNOSP40205 109 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 CXCL5P42830 114 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 RHOHQ15669 191 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 TRAV4A0A0B4J268 109 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 C2orf66Q6UXQ4 117 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 RASL10AQ92737 203 aa6.69□□□□□ -1.34
PDE6A-204ENST00000613228 LINC00526Q96FQ7 95 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms