RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 HOXA5P20719 270 aa6.05□□□□□ -1.44
SNCA-212ENST00000611107 CEBPGP53567 150 aa6.05□□□□□ -1.44
SNCA-212ENST00000611107 LGALS9BQ3B8N2 356 aa6.05□□□□□ -1.44
SNCA-212ENST00000611107 CLLU1Q5K131 121 aa6.05□□□□□ -1.44
SNCA-212ENST00000611107 DNLZQ5SXM8 178 aa6.05□□□□□ -1.44
SNCA-212ENST00000611107 C18orf15Q96N68 181 aa6.05□□□□□ -1.44
SNCA-212ENST00000611107 IGLV2-18A0A075B6J9 118 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 GRIFINA4D1Z8 144 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 RTL8CO15255 209 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 ATP5G1P05496 136 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 ASIPP42127 132 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 TCTAP57738 103 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 OR5I1Q13606 314 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 POM121L12Q8N7R1 296 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 RASL10AQ92737 203 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 SMIM7Q9BQ49 75 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 SPXQ9BT56 116 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 NDUFAF3Q9BU61 184 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 HERC2O95714 4834 aa6.04□□□□□ -1.44
SNCA-212ENST00000611107 F5H768 121 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 M0R2P5 195 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 CXCL1P09341 107 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 Q6ZR54 194 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 OCC1Q8TAD7 63 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 IL36BQ9NZH7 164 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
SNCA-212ENST00000611107 TRGV2A0A075B6R0 118 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 A0A1B0GVY2 172 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 ZNF727A8MUV8 499 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 NXPH4O95158 308 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 IGHV3-53P01767 116 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 SFTA3P0C7M3 94 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 GZMBP10144 247 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 S100A4P26447 101 aaKnown RBP6.02□□□□□ -1.45
SNCA-212ENST00000611107 RAB14P61106 215 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 PEA15Q15121 130 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 LINC01551Q86U37 167 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 RNASE7Q9H1E1 156 aaKnown RBP6.02□□□□□ -1.45
SNCA-212ENST00000611107 SMDT1Q9H4I9 107 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 SCRT2Q9NQ03 307 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 LY96Q9Y6Y9 160 aa6.02□□□□□ -1.45
SNCA-212ENST00000611107 TRAV4A0A0B4J268 109 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 A0A0J9YY99 117 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 SNAI2O43623 268 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 P01737 135 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 ARMS2P0C7Q2 107 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 IGLC6P0CF74 106 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 MED14OSP0DP75 135 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 ZNF876PQ49A33 203 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 OR2D3Q8NGH3 330 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 PTH2Q96A98 100 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 VSIG2Q96IQ7 327 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 ZNF479Q96JC4 524 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 LINC00588Q9Y4M8 146 aa6.01□□□□□ -1.45
SNCA-212ENST00000611107 TRAV26-1A0A087WT03 109 aa6□□□□□ -1.45
SNCA-212ENST00000611107 RS1O15537 224 aa6□□□□□ -1.45
SNCA-212ENST00000611107 NUDT3O95989 172 aa6□□□□□ -1.45
SNCA-212ENST00000611107 P0DMU3 169 aa6□□□□□ -1.45
SNCA-212ENST00000611107 FAM231AP0DMU4 169 aa6□□□□□ -1.45
SNCA-212ENST00000611107 FAM231CP0DMU5 169 aa6□□□□□ -1.45
SNCA-212ENST00000611107 FHL2Q14192 279 aa6□□□□□ -1.45
SNCA-212ENST00000611107 PIK3CD-AS1Q5SR53 167 aa6□□□□□ -1.45
SNCA-212ENST00000611107 CFAP126Q5VTH2 177 aa6□□□□□ -1.45
SNCA-212ENST00000611107 FAM231DQ6ZW35 169 aa6□□□□□ -1.45
SNCA-212ENST00000611107 NUDT10Q8NFP7 164 aa6□□□□□ -1.45
SNCA-212ENST00000611107 OR10AG1Q8NH19 301 aa6□□□□□ -1.45
SNCA-212ENST00000611107 NUDT11Q96G61 164 aa6□□□□□ -1.45
SNCA-212ENST00000611107 FAM210BQ96KR6 192 aa6□□□□□ -1.45
SNCA-212ENST00000611107 KRTAP1-5Q9BYS1 174 aa6□□□□□ -1.45
SNCA-212ENST00000611107 RPP21Q9H633 154 aaKnown RBP6□□□□□ -1.45
SNCA-212ENST00000611107 BIN3Q9NQY0 253 aa6□□□□□ -1.45
SNCA-212ENST00000611107 M0R381 172 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 OR5AL1P0C617 328 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 CTRLP40313 264 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 RPL23P62829 140 aaKnown RBP5.99□□□□□ -1.45
SNCA-212ENST00000611107 FAM74A3Q4VXF1 159 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 DMRTA1Q5VZB9 504 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 ZFP82Q8N141 532 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 OR4C5Q8NGB2 326 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 ZNRF2Q8NHG8 242 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 ISOC2Q96AB3 205 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 DAZAP1Q96EP5 407 aaKnown RBP5.99□□□□□ -1.45
SNCA-212ENST00000611107 SSBP4Q9BWG4 385 aaPredicted RBP5.99□□□□□ -1.45
SNCA-212ENST00000611107 KRTAP17-1Q9BYP8 105 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 JPT2Q9H910 190 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 NAT8Q9UHE5 227 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 PHLDA3Q9Y5J5 127 aa5.99□□□□□ -1.45
SNCA-212ENST00000611107 MUC21A0A0G2JKD1 596 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 MUC21A0A140T8X8 626 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 GATA1P15976 413 aaPredicted RBP5.98□□□□□ -1.45
SNCA-212ENST00000611107 ADCYAP1P18509 176 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 CRYBA4P53673 196 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 RPS20P60866 119 aaKnown RBP5.98□□□□□ -1.45
SNCA-212ENST00000611107 ADIRFQ15847 76 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 ESRGQ1W209 222 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 SOHLH1Q5JUK2 328 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 UFSP1Q6NVU6 142 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 COMMD7Q86VX2 200 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 UBE2DNLQ8IWF7 75 aa5.98□□□□□ -1.45
SNCA-212ENST00000611107 FER1L6-AS1Q8NA97 138 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms